Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01931 ATGGTGCTTGTAAAGCTGAGCAAAATCAATATTGAAACTACCTTCGATGGATTCATAAATTGGCCATGTCTAATAGATGCCCATTTCTTTTCATCGGAAACGGTTACAGAACAATTGCCAATTGGAGTGTTAGAAATGGATTCTGGTGGTGCTGATCACGAGGCAAGTGCATCTCTTGGTGGTGTTAATGAAAACTCTGAAGGCGTTTCTTCCAGTGGAGAGGTAATTGGAGATCTGGGTACTGCTAGCACAATGCTAACAAGATTGGAATTATTTTTGGAGTGTTGCTCCGAGAAAATAGTCAACTTGAGTCTTTTCATGTTGAACCTGGAAACTCTGGAAAGTGAATTCGCTGAAGCCTATGCTATGGAGAAAGATTATATGGGAACTGATTGTACTGAAAAGGGTATGGAATTCGATCTGTTATCTGGGATTTTCGATGCAGAGATCACAGAACTGGATAGTTTATTGGTAACACTTAAACATGATATTACTGATCTTAGAGAGAGGATATCTTCGTGCAAACATTTGGGAGAGACTTTCATGGCAATGCAAGAAAAGTTGAGTGGTTCTGAACGATATTTGAAACAGTCTGAGGAGCAGTTTGCTGAAATAAAGATGCAATCAGCCAATTTCCAGAGGGCTTCGTCTTGTTTCAAGAGGGTAGAAAATTCAGGGAGTGGTGAAGAGGGTGCTATAATGCGAGAGGATGATGAAAAGCAGAATTTAAATGCAGAGATAAAGATGCAAACAACTGAGCAACAAAGACGTATTCTGAGGATGCTAGAGAAATCTTTGGCAAGTGAAATGGATCTTGAGAAGAATTTAAATGATTCAAGACAAATTGAAGGAGAGCTAAAGTTAAGGATTCTCTCTTTAGAAGAAGAGCTAGTTCACATGGAGGAAGAAGCAACTGACTTTTGGGGAAAATGGGTTGAAGCAGATAACACAAATGAGGTTCTTTTTGGAATATCAAGAGACCTTCTGGGTAGACTCCAGATCACTCAGTTCAATTTGAATGGTCTAAGTAAGCGTGAATCTGAGCTTAGAGCAAAGCTTGAAGAATATGAGTTTCAGCTAAAGAATGCAAAGTCCTCTGCTTATGCTAGTCACGAGAAGTATAATGTTTTATGTTCTGAAGTAAGAAGTAAGAACAATCTTACTGAACAACTGAAAGAACATGTATCTGAGGCTGAAAGTAGGGCCACCACTGCAGAAGCTCAGTGTAAACAATTGAGAGAAACAAATGCAGAACTCATCCAAGAGCTGGCTGTTTTGAATGATGGTGCCTCTGAGAGGGTGGATTCACTCAAGAAGCAGTTAAAGGAATCTGCCGTGCAGCTACAGCATGCACTAGCATCTGAGGAAGCTAGTCAAGAGAAACAAAGTATGTTGTATTCCACTATCAGAGATATGGAAAATGTGATTATGGATCTTAAGTCAAAGGTTTCTAAAGCCGAGAATCTGGCTGACAGTGCAGAGGAGAAGTGTATTATATTATCTGAATCTAATGCTGAGTTAAATGAGGAACTGAGCTTCTTGAGGAATAGATTGGAATGCTTGGAGGGATCCCTGCACCAAATGGAGGAAGCAAAAGTGGCAACTGCAAAGGATATTGGCTTGCGGACAAaaggttttaaaaatttagtcaCACAGCTGGCCTTTGAGAGAGAGCGTCTTAGTAAGCAGATATCTTCATTAGCAATTGAGAACAAAATTTTGGTAGTGAAGCTGAAGCAGACATATAAGGCTCCTTGTCTAGGTACTAATGGTTTTAGCGGAGACTCTGGTTTTTCtgctaaagaaattaaagttagTGAGACATCACCTACTGGCCATGAGGTGGACGGAGCTAGCAAAAATTTTTCTGCATCTGATAATGAAGAGAAGTTCGCAGATTCTAAGCCAGATGTTGGTACTGTGAGGAGAATAGATGTAGGGGTGCTTAATGTTAAGAATTTGCTCATAGCGGTGCTTGTCTTACTGGTTTCAGCTGTGGCCTACTTGTTTCAACAGCAGAAGTTTTG 2027 0.3966 MVLVKLSKINIETTFDGFINWPCLIDAHFFSSETVTEQLPIGVLEMDSGGADHEASASLGGVNENSEGVSSSGEVIGDLGTASTMLTRLELFLECCSEKIVNLSLFMLNLETLESEFAEAYAMEKDYMGTDCTEKGMEFDLLSGIFDAEITELDSLLVTLKHDITDLRERISSCKHLGETFMAMQEKLSGSERYLKQSEEQFAEIKMQSANFQRASSCFKRVENSGSGEEGAIMREDDEKQNLNAEIKMQTTEQQRRILRMLEKSLASEMDLEKNLNDSRQIEGELKLRILSLEEELVHMEEEATDFWGKWVEADNTNEVLFGISRDLLGRLQITQFNLNGLSKRESELRAKLEEYEFQLKNAKSSAYASHEKYNVLCSEVRSKNNLTEQLKEHVSEAESRATTAEAQCKQLRETNAELIQELAVLNDGASERVDSLKKQLKESAVQLQHALASEEASQEKQSMLYSTIRDMENVIMDLKSKVSKAENLADSAEEKCIILSESNAELNEELSFLRNRLECLEGSLHQMEEAKVATAKDIGLRTKGFKNLVTQLAFERERLSKQISSLAIENKILVVKLKQTYKAPCLGTNGFSGDSGFSAKEIKVSETSPTGHEVDGASKNFSASDNEEKFADSKPDVGTVRRIDVGVLNVKNLLIAVLVLLVSAVAYLFQQQKF 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01931 675 Coils Coil 388 458 - -
Bva03g01931 675 MobiDBLite consensus disorder prediction 52 73 - -
Bva03g01931 675 Coils Coil 233 255 - -
Bva03g01931 675 PANTHER WPP DOMAIN-INTERACTING TAIL-ANCHORED PROTEIN 1 352 674 IPR039976 -
Bva03g01931 675 Coils Coil 283 303 - -
Bva03g01931 675 MobiDBLite consensus disorder prediction 609 633 - -
Bva03g01931 675 Coils Coil 195 215 - -
Bva03g01931 675 Coils Coil 469 531 - -
Bva03g01931 675 PANTHER WPP DOMAIN-INTERACTING TAIL-ANCHORED PROTEIN 1 65 361 IPR040060 -
Bva03g01931 675 PANTHER WPP DOMAIN-INTERACTING TAIL-ANCHORED PROTEIN 1 352 674 IPR040060 -
Bva03g01931 675 MobiDBLite consensus disorder prediction 609 625 - -
Bva03g01931 675 MobiDBLite consensus disorder prediction 59 73 - -
Bva03g01931 675 PANTHER WPP DOMAIN-INTERACTING TAIL-ANCHORED PROTEIN 1 65 361 IPR039976 -
Bva03g01931 675 SUPERFAMILY Tropomyosin 337 528 - -
Bva03g01931 675 Coils Coil 339 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01931 Bva-Chr3 17373186 17379460 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01931 - - lja:Lj1g3v3091530.1 597.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01931 03 17373186 17379460 Bva01g01857 01 19079677 19083831 BWGD
Bva03g01931 03 17373186 17379460 Bva03g01931 03 17373186 17379460 ECH