Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01786 ATGGCTTGGTGGGATTTAAGATCgctctctttttttcaaagGATTAGGAATCATTTTCAGGATGTATCAACAAGGGGGCTGGGGATCTCCGCAGGGACTGGTGGTCGCTTTTCATCCATTAATTTTCCATTGATAGACAGGAAGAATGAACAGTTCAGGATGAGAGAAGTCCAGCTTGGTTCCCACACTGTGAAATCTCATGGATATTCAGTTGCAAGAACGCACATGCATGATTGGCTTATACTTATGCTCCTTGTGTTGATAGAGATTATCCTATACATAATCCATCCTTTCTCTCGCTTTGTTGGGAAGGATATGATGACTGATCTCAGATATCCCCTCAAGAGTAATACAGTTCCTGTTTGGGCTGTTCCTATGTATGCAGTTTTATTGCCTATAGTTGTCTTTCTTGTTGTCTATTTCCGAAGAAGAGATGTCTACGATCTTCATCATGCTGTACTAGGTCTCTTGTTCTCTATTTTAGTAACGGCAGTAATTACTGATGCAATAAAAAATGCAGTAGGTCGACCACGACCAGACTTCTTCTGGCGTTGTTTTCCAGATGGAAAGGATGTCTATGATCAACTGGGAAATGTCATATGCCACGGTGAGAAGAAGGTTATAAAGGAAGGACACAAGAGTTTCCCAAGTGGCCACACTTCATGGTCCTTTGCGGGTCTGGGATTCTTATCATTGTACTTGtcaggaaaaataaaagcatttgACAGTGCTGGCCATGTTGCAAAACTTTGCCTTGTTTTTCTCCCTCTTCTTTTTGCATCCCTTGTTGGGATATCTCGAGTCGACGACTACTGGCACCACTGGGAGGACGTTTTTGCCGGAGGTCTTATAGGGCTCGTAGTGGCGGCATTTTGCTATTTACAGTTTTTTCCTCCTCCTTATCATCCTCAAGGATGGGGACCTTATGCGTACTTCAGGTCACTGGAAGACTCGCCTGATAGTACGCAAGCAAATAATGGTCAAGATAGTTCCAATGTTCAGTCAGCAGAGGGTCAGGTTGAGAACCAGGAGGGGCAAAACTGTCATGGGTGCATTGGGTTATCTTTGGCTCGCAATCGCAGTTCGGCATCTGATGACATTGAATCTGGTAGAAAATA 1118 0.4249 MAWWDLRSLSFFQRIRNHFQDVSTRGLGISAGTGGRFSSINFPLIDRKNEQFRMREVQLGSHTVKSHGYSVARTHMHDWLILMLLVLIEIILYIIHPFSRFVGKDMMTDLRYPLKSNTVPVWAVPMYAVLLPIVVFLVVYFRRRDVYDLHHAVLGLLFSILVTAVITDAIKNAVGRPRPDFFWRCFPDGKDVYDQLGNVICHGEKKVIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIKAFDSAGHVAKLCLVFLPLLFASLVGISRVDDYWHHWEDVFAGGLIGLVVAAFCYLQFFPPPYHPQGWGPYAYFRSLEDSPDSTQANNGQDSSNVQSAEGQVENQEGQNCHGCIGLSLARNRSSASDDIESGRK 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01786 372 PANTHER LIPID PHOSPHATE PHOSPHATASE 47 371 IPR043216 GO:0006644
Bva03g01786 372 SMART acid_phosph_2 153 293 IPR000326 -
Bva03g01786 372 Pfam PAP2 superfamily 153 297 IPR000326 -
Bva03g01786 372 Gene3D Phosphatidic acid phosphatase type 2/haloperoxidase 72 305 - -
Bva03g01786 372 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 74 304 IPR036938 -
Bva03g01786 372 MobiDBLite consensus disorder prediction 318 345 - -
Bva03g01786 372 CDD PAP2_containing_1_like 108 296 - -
Bva03g01786 372 PANTHER LIPID PHOSPHATE PHOSPHATASE 1 47 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01786 Bva-Chr3 16027145 16031229 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01786 54 371 Lipid Metabolism Gene Families AT3G02600 71.473 4.61e-173 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01786 K18693 - gmx:100819064 585.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01786 03 16027145 16031229 Bva04g00845 04 5548150 5554033 ECH
Bva03g01786 03 16027145 16031229 Bva03g00700 03 4180582 4184802 ECH
Bva03g01786 03 16027145 16031229 Bva03g01786 03 16027145 16031229 ECH
Bva03g01786 03 16027145 16031229 Bva04g00587 04 3846945 3850259 ECH
Bva01g01668 01 17834212 17838228 Bva03g01786 03 16027145 16031229 ECH
Bva11g00718 11 10168102 10168317 Bva03g01786 03 16027145 16031229 ECH