Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01506 atggTGAAGGGGCTTCTTGCTCTGCTTTTATTTGCCTTTGGGTTGACCCTTTCAGAGTCGAAATCCTCTATTCTTCAGCCTCATGCTGCCGATTCCTTCAACGTCAGCTATATCCAGCTAAAGAACGCAGGGACCTGTTCTTACACGCTAGTTGTCTCTACAAGTTGTTCTTCACCTAGATATACGAGGGATCAGATCAGTATTGCTTTTGGGGATGCTTATGGCAACCAGATATATGCACCAAGATTGGATGATCCATCTTCAAAGACATTTGAGCGGTGTTCTTCGGATACATTTCAAATAAATGGTCCATGTGCGTATCAAATCTGTTATGTTTATGCATATAGAACTGGACTAGATGGTTGGCGGCCTGAAACTGTGAAAATCTATGGTCATAATACAAGGGCGGTTACGTTTTACTACAACACATTCATCCCTGCAGATACTTGGTATGGGTTCAATCTGTGCAACGCCTCATCTTCTTCACACCAACTCTCTAGTCATCTGATATGGATTATATGTATGGTTCTGGGTTTTGTTCTTAGTTTCGGTTTGTA 557 0.4165 MVKGLLALLLFAFGLTLSESKSSILQPHAADSFNVSYIQLKNAGTCSYTLVVSTSCSSPRYTRDQISIAFGDAYGNQIYAPRLDDPSSKTFERCSSDTFQINGPCAYQICYVYAYRTGLDGWRPETVKIYGHNTRAVTFYYNTFIPADTWYGFNLCNASSSSHQLSSHLIWIICMVLGFVLSFGL 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01506 185 CDD PLAT 46 157 - -
Bva03g01506 185 PANTHER EMBRYO-SPECIFIC PROTEIN ATS3B 7 182 - -
Bva03g01506 185 PANTHER - 7 182 - -
Bva03g01506 185 Gene3D PLAT/LH2 domain 41 153 - -
Bva03g01506 185 Pfam Embryo-specific protein 3, (ATS3) 38 156 IPR010417 -
Bva03g01506 185 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 44 153 IPR036392 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01506 Bva-Chr3 14220157 14221530 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01506 - - gmx:100499692 276.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01506 03 14220157 14221530 Bva03g01506 03 14220157 14221530 ECH