Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01500 ATGGAAACCCTTTCCGAGCAAAAGCATGCAGCCACCACTAACCAGTTCACTCTGTTTTGGAAGCATTTTCCTTCAAATCTCTTGAAATTTCCATGGATTTTTACTATCATACTTTTAACATCCACTGAAGCATTTCTTCTCCTGCAAAGTTGCGAACCAACCATGTTCCATTTCCTTTTACTCTgcattttccttctctattTCATCCTCAAGCAATTCCTTTCAAAGCCTAAACCAATCTACCTTGTGGATTTCTCATGTCTTAAGCCTGAGAGCTGTTTGAGAGTACCTTTCTCCAAGTTCCTCAGGAATGCCTCCATGATTGATGGTTTTGACAGTGAAAGCATAGCTTTCATGGCCAAAGTCCTCACTTCCTCGGGGATAAGCCAAGAGACGTGTCTTCCCCCAGCCTTGCATCGCATTCCTCCGAAAACCCATCAACGAGAATCCATCAAAGAAGCAGAAATGGTGCTTTTTCCCATCATGGACGATCTCTTGGCAAAAACCAAACTTTCACCTCGTGACATAGACATACTCATTGTAAATTGCAGTGGGTTTTGTCCCTCACCCTCTTTGAGCTCCATTGTCATAAACAAATACTCCATGAGAAGTGACATCAAGAGCTACAATATCTCTGGCATGGGCTGCAGTGCAAGCGCTCTCTGTATTGATTTAGCCCATAATCTTCTCAAAGTTCACAACAATTCTAATGCTGTAGTTCTTAGCACAGAGATTTTGTCAAACGGTTGGTATGCAGGTAATGAACGGTCCAAATTGCTGATCAACTGCCTCTTCCGGATGGGGAGTGCAGCGATTCTGCTCACAAACAAGACAGAGGCAAAGAAATCCTCAAAGTACAGGTTGCTCAGGACACTGAGAACCCAGAGAGCCTTTGACGAAAAAGCTTACCTTTCAGCCTTCAGAGAAGAGGATTCTAATGGAAAACTTGGGGTGACACTCAAAAGGGATTTGCTTCAGGTAGCTGGCGAAACACTACGCGCAAATATCTCCATTCTGGGTTCGGAAATCTTGCCTTTCTCAGAGAAATTCTGGTACGGTGTCTCTGTAATGCAGAAGAAATTCATCAACAAGGCGGAGGGAATTTATGTGCCAAATTTCAAGACTGTGATTCAGCACTTCTGCTTGCCATCTTCAGGGAGACCAGTGATAAGAGAAATAGGCAAAGGTTTGAAGCTCGCAGAGAGAGATATGGAGCCTGCTCTCACGACTCTGCACAGGTTTGGAAATCAGTCGTCTTCTTCACTTTGGTACGAATTAGCTTACTTGGAAGCCAAGGAAAGAGTGCAGAAACGTGACAAGATCTGGCTACTGGGAATGGGGAGTGGGCCCAAGTGTAATAGTGTAGTTTTAGAGTGCTTTAGGCCCATAGTTGGACGGTCCAACAAAGGCCCATGGGATGACTGTATTCATCGATATCCAAGTGTAGTTGAAAATTA 1457 0.4358 METLSEQKHAATTNQFTLFWKHFPSNLLKFPWIFTIILLTSTEAFLLLQSCEPTMFHFLLLCIFLLYFILKQFLSKPKPIYLVDFSCLKPESCLRVPFSKFLRNASMIDGFDSESIAFMAKVLTSSGISQETCLPPALHRIPPKTHQRESIKEAEMVLFPIMDDLLAKTKLSPRDIDILIVNCSGFCPSPSLSSIVINKYSMRSDIKSYNISGMGCSASALCIDLAHNLLKVHNNSNAVVLSTEILSNGWYAGNERSKLLINCLFRMGSAAILLTNKTEAKKSSKYRLLRTLRTQRAFDEKAYLSAFREEDSNGKLGVTLKRDLLQVAGETLRANISILGSEILPFSEKFWYGVSVMQKKFINKAEGIYVPNFKTVIQHFCLPSSGRPVIREIGKGLKLAERDMEPALTTLHRFGNQSSSSLWYELAYLEAKERVQKRDKIWLLGMGSGPKCNSVVLECFRPIVGRSNKGPWDDCIHRYPSVVEN 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01500 485 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 377 458 IPR013747 -
Bva03g01500 485 PANTHER 3-KETOACYL-COA SYNTHASE 20 481 - -
Bva03g01500 485 SUPERFAMILY Thiolase-like 69 279 IPR016039 GO:0016746
Bva03g01500 485 PANTHER 3-KETOACYL-COA SYNTHASE 20 481 IPR012392 GO:0006633|GO:0016020|GO:0016747
Bva03g01500 485 PIRSF Very_long_ch_3-ktacl-CoA_syn 6 485 IPR012392 GO:0006633|GO:0016020|GO:0016747
Bva03g01500 485 Gene3D - 102 458 IPR016039 GO:0016746
Bva03g01500 485 Pfam FAE1/Type III polyketide synthase-like protein 74 360 IPR013601 GO:0006633|GO:0016020|GO:0016747
Bva03g01500 485 CDD CHS_like 81 457 - -
Bva03g01500 485 SUPERFAMILY Thiolase-like 265 460 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01500 Bva-Chr3 14188962 14190419 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01500 27 483 Miscellaneous Gene Families AT1G25450 46.421 5.72e-155 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01500 K15397 - gmx:100818350 702.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01500 03 14188962 14190419 Bva03g01500 03 14188962 14190419 ECH