Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01480 ATGGCAATTGACTGCTTAACAAGCTTCCCTTCCATGCCTCTTCCACCAAAGAAAGAgcacaaagaagaagaaccaCCATTAGTGTTCGATGCTTCAGTTCTCAGCAACCAAATCCATCTACCAAAGCAGTTCATTTGGCCTGATGAAGAGAAGCCATGCTTGAGCGCGCCAGAGCTTGTAGTCCCACTAGTTGACTTAGGAGGGTTTCTCTCCGGTGATCCGGTTGCAGCACTTGAAGCCTCCAGAATTGTCGGCGAAGCATGCCGAAAGCACGGTTTCTTTCTTGTTGTAAATCATGGGATTGATTCCAAGTTAATCTCTGATTCCCACAGTTACATGGATGACTTCTTTGAGCTTCCCCTGTCTCGGAAACAGAGAGCTCAGAGGAAAACAGGGGAGCACTGTGGTTATGCCAGTAGCTTCACTGGCAGGTTCTCCTCTAAGCTCCCGTGGAAAGAAACACTCTCCTTTCAATTTTCAGATGAAAAAAACTCACCCAAGATTGTCAAGAACTACCTGTGCAACACATTGGGAGAGGAATTCGAGCGATTCGGGCAGGTGTACCAAGAATACTGTGAAGCGATGAGCAACCTTTCTCTAGGGATAATGGAGCTTCTTGGAATGAGCCTTGGAGTTGGGAGTTCCTTTTTCAGGGAGTTCTTTGAAGAAAACAGTTCTATAATGAGGCTCAATTACTACCCACCATGCCAAAAACCTGACCTCACCTTAGGTACTGGCCCTCATTGTGATCCAACATCTTTAACTATTCTGCACCAAGACAAAGTGGGTGGCCTGCAAGTTTATGTTGACAATGAGTGGCATTCCATTAGCCCTAATTTCAATGCATTTGTGGTCAATATTGGTGATACCTTCATGgcTCTTTCAAATGGGAAATACAGGAGTTGCTTGCATAGGGCAGTGGTGAACAGCAAGACAACAAGAAAGTCTCtggctttctttttgtgtCCAAGAAGTGATAAAGTGGTTAGTCCACCAAGTGAATTAGTGGATAATTTCAGTCCAAGGGTCTATCCAGATTTTACATGGCCTATGCTGCTTGAGTTCACTCAGAAGCATTATAGAGCTGACATGAAAACCCTTGAGGTATTCTCCAATTGGCTCCAACAGAACAGAAATAGCCTAATTTCAAGTACATA 1157 0.4304 MAIDCLTSFPSMPLPPKKEHKEEEPPLVFDASVLSNQIHLPKQFIWPDEEKPCLSAPELVVPLVDLGGFLSGDPVAALEASRIVGEACRKHGFFLVVNHGIDSKLISDSHSYMDDFFELPLSRKQRAQRKTGEHCGYASSFTGRFSSKLPWKETLSFQFSDEKNSPKIVKNYLCNTLGEEFERFGQVYQEYCEAMSNLSLGIMELLGMSLGVGSSFFREFFEENSSIMRLNYYPPCQKPDLTLGTGPHCDPTSLTILHQDKVGGLQVYVDNEWHSISPNFNAFVVNIGDTFMALSNGKYRSCLHRAVVNSKTTRKSLAFFLCPRSDKVVSPPSELVDNFSPRVYPDFTWPMLLEFTQKHYRADMKTLEVFSNWLQQNRNSLISST 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01480 385 Pfam non-haem dioxygenase in morphine synthesis N-terminal 61 167 IPR026992 -
Bva03g01480 385 SUPERFAMILY Clavaminate synthase-like 32 363 - -
Bva03g01480 385 Pfam 2OG-Fe(II) oxygenase superfamily 226 323 IPR044861 -
Bva03g01480 385 Gene3D - 31 361 IPR027443 -
Bva03g01480 385 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 17 376 - -
Bva03g01480 385 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 224 323 IPR005123 -
Bva03g01480 385 MobiDBLite consensus disorder prediction 1 22 - -
Bva03g01480 385 PRINTS Isopenicillin N synthase signature 84 101 - -
Bva03g01480 385 PRINTS Isopenicillin N synthase signature 283 309 - -
Bva03g01480 385 PRINTS Isopenicillin N synthase signature 248 269 - -
Bva03g01480 385 PANTHER ISOPENICILLIN N SYNTHASE-RELATED 17 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01480 Bva-Chr3 14078327 14080123 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01480 39 373 Glycosyltransferase AT5G59530 28.363 2.71e-33 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01480 K05282 - gmx:100305378 664.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01480 03 14078327 14080123 Bva03g01480 03 14078327 14080123 ECH