Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01479 ATGGCTTCATTATTCAGGTTTGATAACTTGCTCCGCTCTTCGTTTAATCCGCAAAAAGCTATCTTTCCATCTCCAATCCATTCTTTCTCTCACCGATCGTGCCCTGCTCTCAATAAAGTTACAAAATTTCCTCTGAGAGTCACCCGAATTCCCACCATTAGAGCAGCTTCATCTCCCGCAACTATTGCCGAGCCAGAAGGCATTAAGATTAATTCAGTTCCCACCAAACCAATCGAAGGACAGAAGACAGGGACAAGCGGGCTTCGAAAGAAGGTGAAGGTgtttaatgaagaaaattacCTCGCAAATTGGATTCAgGCACTATTTAATTCATTGCCTCCGGAGGATTACAAGAACGGTGTATTAGTGTTGGGAGGTGATGGTCGTTACTTTAACAAGGAAGCTGCACAGATAATCATCAAAATTGCTGCTGGTAATGGTGTTGGAAAAATTTTGGTTGGCAAGGAAGGTATATTGTCAACACCCGCTGTTTCTGCTGTGATAAGGAAGAGGAAGGCTAATGGTGGATTTATCATGAGTGCAAGCCATAATCCTGGTGGGCCTGAATATGATTGGGGTATCAAgTTTAATTACAGCAGTGGGCAGCCTGCACCAGAATCCATCACTGACAAAATTTATGGAAACACTTTATCCATATCGGAAATAAAATTGGCTGACATTCCTGATGTTGACTTATCACAATTTGGTGTTACAAAGTATGGAAGCTTCAGTGTGGAAGTAATAAATCCAGTTTCAGACTATTTGGAGCTGCTGGAGACGGTATTTGATTTCCCCCTAATCCAAAATCTTCTTGCACGGCCAGATTTTAGGTTTATATTTGATGCCATGCATGCAGTTACTGGTGCTTATGCTAAACCCATCTTTGTTGATAAACTAGGTGCTAGTCTGgattcaatttcaaatggaGTGCCTTTGGAAGATTTTGGACATGGTCATCCAGATCCTAATCTTACATATGCCAAGGATCTTGTCGATATTATGTATGGCGAAAATGGACCCGATTTTGGAGCTGCTAGTGATGGTGATGGTGATAGAAACATGATTTTGGGAAAAAGCTTTTTTGTTACTCCATCAGATTCTGTCGCAATAATTGCAGCCAATGCTGGAGAAGCAATTCCATACTTCAGGAACAGTGTTAAGGGTCTTGCCCGATCAATGCCAACAAGTGGTGCTTTGGATCGTGTTGCTGAAAAATTGAACCTCCCTTTCTTTGAgGTTCCTACTGGGTGGAAATTTTTTGGGAATCTTATGGATGCCGGGAAGTTGTCCATTTGTGGGGAAGAGAGCTTTGGAACAGGTTCTGATCACATACGCGAAAAGGACGGCATCTGGGCTGTATTAGCTTGGCTTTCTATTCTTGCACAAGCCAACAAAGGCAAGAAACCAGGGGAGAAATTGATGTCTGTATCTGATATTGTGAAGAAGCACTGGGAAACTTAtggaagaaatttcttttctagataTGACTATGAGGAATGTGAATCTGAAGGTGCTAATAAGATGGTAGAATACCTACGAGAGTTTATCTCTAAGAGCAAGCCTGGTGATAAATTTGGAAGTTATTCCCTCCAGTTTGCTGATGATTTCACATATACTGATCCAGTAGATGGAAGTGTGGTATCAAAACAAGGTGTTCGGTTTGTTTTTACAGATGGATCAAGAATTATATTCCGATTATCGgGAACTGGCTCTGCAGGTGCAACTATTAGAGTTTATATTGAACAGTTTGAGCCAGATGCCTCTAAACATGATTTGGATGCTCAAACTGCCTTAAAACCATTAATAGATTTGGCATTATCTGTTTCTAAGCTGAAGGAATTCACAGGGAGAGAGAAACCTACCGTCATCACATA 1874 0.4013 MASLFRFDNLLRSSFNPQKAIFPSPIHSFSHRSCPALNKVTKFPLRVTRIPTIRAASSPATIAEPEGIKINSVPTKPIEGQKTGTSGLRKKVKVFNEENYLANWIQALFNSLPPEDYKNGVLVLGGDGRYFNKEAAQIIIKIAAGNGVGKILVGKEGILSTPAVSAVIRKRKANGGFIMSASHNPGGPEYDWGIKFNYSSGQPAPESITDKIYGNTLSISEIKLADIPDVDLSQFGVTKYGSFSVEVINPVSDYLELLETVFDFPLIQNLLARPDFRFIFDAMHAVTGAYAKPIFVDKLGASLDSISNGVPLEDFGHGHPDPNLTYAKDLVDIMYGENGPDFGAASDGDGDRNMILGKSFFVTPSDSVAIIAANAGEAIPYFRNSVKGLARSMPTSGALDRVAEKLNLPFFEVPTGWKFFGNLMDAGKLSICGEESFGTGSDHIREKDGIWAVLAWLSILAQANKGKKPGEKLMSVSDIVKKHWETYGRNFFSRYDYEECESEGANKMVEYLREFISKSKPGDKFGSYSLQFADDFTYTDPVDGSVVSKQGVRFVFTDGSRIIFRLSGTGSAGATIRVYIEQFEPDASKHDLDAQTALKPLIDLALSVSKLKEFTGREKPTVIT 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01479 624 ProSitePatterns Phosphoglucomutase and phosphomannomutase phosphoserine signature. 176 185 IPR016066 GO:0000287
Bva03g01479 624 Gene3D - 263 361 - -
Bva03g01479 624 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 253 356 IPR005845 GO:0005975
Bva03g01479 624 CDD PGM1 73 624 - -
Bva03g01479 624 Pfam Phosphoglucomutase/phosphomannomutase, C-terminal domain 548 599 IPR005843 GO:0016868|GO:0071704
Bva03g01479 624 SUPERFAMILY Phosphoglucomutase, first 3 domains 70 282 IPR016055 GO:0005975|GO:0016868
Bva03g01479 624 PANTHER PHOSPHOHEXOMUTASE FAMILY MEMBER 47 624 IPR045244 GO:0004614|GO:0005975
Bva03g01479 624 Gene3D - 362 459 - -
Bva03g01479 624 PRINTS Phosphoglucomutase/phosphomannomutase family signature 311 324 IPR005841 GO:0005975|GO:0016868
Bva03g01479 624 PRINTS Phosphoglucomutase/phosphomannomutase family signature 340 355 IPR005841 GO:0005975|GO:0016868
Bva03g01479 624 PRINTS Phosphoglucomutase/phosphomannomutase family signature 175 189 IPR005841 GO:0005975|GO:0016868
Bva03g01479 624 PRINTS Phosphoglucomutase/phosphomannomutase family signature 275 294 IPR005841 GO:0005975|GO:0016868
Bva03g01479 624 Gene3D - 470 624 - -
Bva03g01479 624 SUPERFAMILY Phosphoglucomutase, first 3 domains 348 494 IPR016055 GO:0005975|GO:0016868
Bva03g01479 624 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 81 220 IPR005844 GO:0005975|GO:0016868
Bva03g01479 624 SUPERFAMILY Phosphoglucomutase, first 3 domains 252 361 IPR016055 GO:0005975|GO:0016868
Bva03g01479 624 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 364 487 IPR005846 GO:0005975|GO:0016868
Bva03g01479 624 SUPERFAMILY Phosphoglucomutase, C-terminal domain 489 624 IPR036900 GO:0016868|GO:0071704
Bva03g01479 624 Gene3D - 69 257 - -
Bva03g01479 624 PANTHER PHOSPHOGLUCOMUTASE, CHLOROPLASTIC 47 624 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01479 Bva-Chr3 14060842 14067616 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01479 K01835 - gmx:100802730 1074.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01479 03 14060842 14067616 Bva03g01479 03 14060842 14067616 ECH