Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01456 ATGGACCCAGAGAAGAAATTGGAAGacttagagaagaaaaagaagaaggaagaaaagGCAAGGgagaaagaattgaaaaaacaGAAAGCTGCTGAGAAAGCTGCCATGCGTCAGAAACAAGAACAACAAGCATCCAATGCtccaaaaaagaatgaaagaaaaaatgtaaagcGTGGTGCAGATGATGATAATCCTGAAGATTATATTGATCCTGAGACTCCTTTGGGTGAGAAGAAACGGATGTCACATCAAATGGCAAAACAATACAGTCCAAGTGCTGTCGAGAAGTCGTGGTATGAATGGTGGGAGAAATCAGGATTCTTTGTGGCAGATGCTAGTAGCTCCAAACCACCATTTGTTATTGTCTTGCCTCCACCTAATGTGACTGGTGCTCTCCACATAGGCCACGCTCTCACTGCAGCAATAGAGGACACAATGATCCGGTGGCGGAGAATGTCTGGATACAATACTTTATGGGTGCCTGGGATGGACCATGCTGGGATTGCAACACAGGTAGTTGTGGAGAAAAAGATAATGcgtgaaaaaaatttaaccagGCATGATTTGGGTCGTGAAAAGTTTATATCGGagGTTTGGAACTGGAAAAACAAGTATGGGGGGACAATTCTACAGCAACTATGTCGTCTTGGAGCCTCTTTGGATTGGTCTCGTGAGAGCTTCACAATGGATGAAAAAAGATCAAGGGCTGTGATAGAGGCTTTTGTGAGGCTTTATCAACAAGGCCTTATCTATAGGGACCTTCGTTTAGTGAATTGGGATTGTGTCTTACGAACTGCTATATCTGATATTGAGGTggattatattgatattaaagAAAGGACTCCGCTGAAGGTTCCTGGTTATGATAAACCAGTGGAGTTTGGAGTTTTAACTTCATTTGCATACCCTTTGGAAGGGGGCCTAGGTGAAATTGTTGTAGCCACAACCAGAATAGAAACCATGTTGGGTGACACTGCTATTGCTGTACACCCTGAGGACAGAAGGTACAGCCATCTACATGGAAAATTTGCCATTCACCCTTTTAATGGCCGAAAACTTCCAATAATTTGTGATGCTATTCTTGTTGATCTGAACTTTGGGACTGGTGCTGTTAAGATTACCCCTGCCCATGACCCAAATGATTTTGAGGTTGGAAAACGACACAACCttgaatttatcaatattttctctGATGATGGGAATATAAATGGCAATGGGGGCTCTGAATTTGTGGGTATGCCACGATTTAAAGCTCGAGAGGCAGTTAAGGAAGCATTAGAAAAGAAGGGCCTTTACAGAGGTTctaaaaacaatgaaatgcGTCTTGGTGTATGTTCAAGAAGCAATGATGTTGTGGAGCCAATGATAAAGCCCCAGTGGTATGTTAGTTGCAATGATTTGGCAAAAAATGCTCTTGATGCTGTCATGGAtgaggaaaacaaaatgatagaGATTATTCCAAAACAATATTCTGCTGACTGGAAGAGATGGCTAGAAAACATACGTGATTGGTGTATTTCACGGCAGCTATGGTGGGGTCACCAGATACCTGCATGGTATGTCACATTAGAGGATGACACCCTGAAGGAATTTGGTGCATACAATGATCGTTGGGTAGTTGCAAGAAACAAGGAAGAGGCTGAAGAGGAGGCAGGCAGAAAGTACAATGGCAAAAAGTTCAATTTGATCCAGGATCCTGATGTTCTTGATACATGGTTTTCTTCTGGTCTGTTCCCTTTATCTGTATTGGGGTGGCCTGATGAAACAGAAGATCTGAGGGCATTTTATCCAACTTCTGTGCTGGAAACTGGCCATGATATCCTCTTCTTCTGGGTTGCTCGCATGGTGATGTTAGGAATGAAGTTGGGTGGTGATGTGCCTTTTAGAAAGGTTTATTTGCATCCTATGATTCGGGATGCACATGGTCGCAAAATGTCCAAGTCCTTAGGAAATGTTATTGATCCTATTGAAGTTATAAATGGGATAAAGCTGGAAGGTCTGCAGAAGAGGTTAGAGGAAACTAACCTGGACCCAAAAGAACTAGCTATTGCCAAAGAGGGTCAGAAAAAGGATTTTCCTAATGGTATTGAGGAATGTGGTGCAGATGCTCTCCGCTTTGCACTAGTCTCATACACAGCTCAGTCTGACAAAATTAATCTAGATATTCAAAGGGTTGTTGGATATCGCCAATGGTGTAATAAGTTGTGGAACGCAATACGGTTTGCTATGACGAAGCTTGGAGATGATTACACTCCATCTACAGATTGGACTCCAGATGTTCTTCCATTTAGCTGTCAGTGGATACTGTCAGTGTTAAATAAAGCCATAACTAAAACACTGAAGTCGCTAGAATCATATGACTTTGCACATGCTGCCACTTCTGTATATTCTTGGTGGCAGTATCAGTTGTGTGATGTCTTTATTGAAGTTATTAAACCGTACTTTGCTGGTGATGGTAGTGAGTTCGCTTCTGAAAGACGTCATGCTCAAAATACTTTGTGGCTATGTCTTGACAATGGTCTGCGGTTGCTTCATCCCTTTATGCCTTTTGTCACGGAAGAATTGTGGCAACGCCTTCCTTCATCAAGGGAATATGAGAAAGCAAAATCCATTATGATATGTGATTATCCATCAATTGTAGAGTGTTGGGACAATGAAAGGGTGGAGAATGAGATGGATCTTTTAGAGTCTGTAGTAAAATCTCTAAGGTCACTGGCAAATGAAAGACGTGACAGGCGACCAGCTTTTATTCTCTGCCGAACACAGGTGCTTGCAGAGTTTATTAACTGCCATAAACTGGAGATTGTTACTCTGGCGAATCTATCGTCTTTGAAAGTAATTAATGAGCATGACGTTCCATCTGGATGTGCTGTGAACGTTGTGAACGAAAGCCTCTCTGTTTATTTAGATCTTAACGTCTCTGCTGAAGCACAGCTAGGAGAGATCAAGAAAAAGATGGATGTGTTGAAGAAGCAAAAGGAAACcttggagaagaaaataaatgcttCTGGCTATAGAGAAAAGGCTTCATCTAATGTTCAAGCAGCTGATGATGAAAAGCTAGCTAGCCTCGTGAAGCAGCTTTTGACACTTGAGGAAACGGCAGGGAAGTTGGAATCTCAAGCATCCAAATA 3134 0.3995 MDPEKKLEDLEKKKKKEEKAREKELKKQKAAEKAAMRQKQEQQASNAPKKNERKNVKRGADDDNPEDYIDPETPLGEKKRMSHQMAKQYSPSAVEKSWYEWWEKSGFFVADASSSKPPFVIVLPPPNVTGALHIGHALTAAIEDTMIRWRRMSGYNTLWVPGMDHAGIATQVVVEKKIMREKNLTRHDLGREKFISEVWNWKNKYGGTILQQLCRLGASLDWSRESFTMDEKRSRAVIEAFVRLYQQGLIYRDLRLVNWDCVLRTAISDIEVDYIDIKERTPLKVPGYDKPVEFGVLTSFAYPLEGGLGEIVVATTRIETMLGDTAIAVHPEDRRYSHLHGKFAIHPFNGRKLPIICDAILVDLNFGTGAVKITPAHDPNDFEVGKRHNLEFINIFSDDGNINGNGGSEFVGMPRFKAREAVKEALEKKGLYRGSKNNEMRLGVCSRSNDVVEPMIKPQWYVSCNDLAKNALDAVMDEENKMIEIIPKQYSADWKRWLENIRDWCISRQLWWGHQIPAWYVTLEDDTLKEFGAYNDRWVVARNKEEAEEEAGRKYNGKKFNLIQDPDVLDTWFSSGLFPLSVLGWPDETEDLRAFYPTSVLETGHDILFFWVARMVMLGMKLGGDVPFRKVYLHPMIRDAHGRKMSKSLGNVIDPIEVINGIKLEGLQKRLEETNLDPKELAIAKEGQKKDFPNGIEECGADALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAIRFAMTKLGDDYTPSTDWTPDVLPFSCQWILSVLNKAITKTLKSLESYDFAHAATSVYSWWQYQLCDVFIEVIKPYFAGDGSEFASERRHAQNTLWLCLDNGLRLLHPFMPFVTEELWQRLPSSREYEKAKSIMICDYPSIVECWDNERVENEMDLLESVVKSLRSLANERRDRRPAFILCRTQVLAEFINCHKLEIVTLANLSSLKVINEHDVPSGCAVNVVNESLSVYLDLNVSAEAQLGEIKKKMDVLKKQKETLEKKINASGYREKASSNVQAADDEKLASLVKQLLTLEETAGKLESQASK 1044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01456 1044 ProSitePatterns Aminoacyl-transfer RNA synthetases class-I signature. 126 137 IPR001412 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Bva03g01456 1044 Pfam tRNA synthetases class I (I, L, M and V) 98 721 IPR002300 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Bva03g01456 1044 CDD ValRS_core 117 720 - -
Bva03g01456 1044 MobiDBLite consensus disorder prediction 1 84 - -
Bva03g01456 1044 TIGRFAM valS: valine--tRNA ligase 85 1021 IPR002303 GO:0000166|GO:0004832|GO:0005524|GO:0006438
Bva03g01456 1044 CDD Anticodon_Ia_Val 720 859 IPR033705 -
Bva03g01456 1044 MobiDBLite consensus disorder prediction 46 64 - -
Bva03g01456 1044 Gene3D HUPs 520 719 IPR014729 -
Bva03g01456 1044 Gene3D HUPs 86 281 IPR014729 -
Bva03g01456 1044 Gene3D - 293 437 IPR009008 GO:0002161|GO:0006418
Bva03g01456 1044 SUPERFAMILY Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 732 972 IPR009080 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Bva03g01456 1044 SUPERFAMILY Nucleotidylyl transferase 84 730 - -
Bva03g01456 1044 MobiDBLite consensus disorder prediction 1 36 - -
Bva03g01456 1044 Gene3D - 726 909 - -
Bva03g01456 1044 Coils Coil 1021 1041 - -
Bva03g01456 1044 SUPERFAMILY ValRS/IleRS/LeuRS editing domain 292 442 IPR009008 GO:0002161|GO:0006418
Bva03g01456 1044 Coils Coil 7 42 - -
Bva03g01456 1044 Pfam Anticodon-binding domain of tRNA ligase 766 908 IPR013155 GO:0004812|GO:0006418
Bva03g01456 1044 PANTHER VALYL-TRNA SYNTHETASES 8 1038 IPR002303 GO:0000166|GO:0004832|GO:0005524|GO:0006438
Bva03g01456 1044 Coils Coil 885 905 - -
Bva03g01456 1044 Coils Coil 972 999 - -
Bva03g01456 1044 Hamap Valine--tRNA ligase [valS]. 85 1039 IPR002303 GO:0000166|GO:0004832|GO:0005524|GO:0006438
Bva03g01456 1044 PRINTS Valyl-tRNA synthetase signature 119 130 IPR002303 GO:0000166|GO:0004832|GO:0005524|GO:0006438
Bva03g01456 1044 PRINTS Valyl-tRNA synthetase signature 330 347 IPR002303 GO:0000166|GO:0004832|GO:0005524|GO:0006438
Bva03g01456 1044 PRINTS Valyl-tRNA synthetase signature 447 460 IPR002303 GO:0000166|GO:0004832|GO:0005524|GO:0006438
Bva03g01456 1044 PRINTS Valyl-tRNA synthetase signature 565 586 IPR002303 GO:0000166|GO:0004832|GO:0005524|GO:0006438
Bva03g01456 1044 PRINTS Valyl-tRNA synthetase signature 596 614 IPR002303 GO:0000166|GO:0004832|GO:0005524|GO:0006438
Bva03g01456 1044 PANTHER BNAA08G31530D PROTEIN 8 1038 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01456 Bva-Chr3 13838807 13848576 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01456 K01873 - jre:108981981 1690.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01456 03 13838807 13848576 Bva03g01456 03 13838807 13848576 ECH