Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01441 ATGGGAAGGCCAAAAAAGTCATTTACACTAATTGGGCTGATGATGTTGCTTCTTTCAGCCACATTTGTGTCAGCTGTGGTGGAATGCGCCACCGTGAGCCTACTCTTCTCCGCCTGCTCCAACTTCCTCTCCTACGGCTCGCCGGACCCTTTTCCGGGCTCCCCTTGTTGTGATGCCATGAAGGGTTTGAACGTTATTGCTGCCAACTCTAGTGACAACACACAATCCCTTTGTAGATGCTTAATGGGCCTGATTGCTACCTACAACCCCAATGCCATTGCCATCGCTACCTTGCCGGGCTTTTGTGGAGTCTCTTTGGGCTTCACCATTGATCCCAACACAGACTGCAATACGTA 356 0.5056 MGRPKKSFTLIGLMMLLLSATFVSAVVECATVSLLFSACSNFLSYGSPDPFPGSPCCDAMKGLNVIAANSSDNTQSLCRCLMGLIATYNPNAIAIATLPGFCGVSLGFTIDPNTDCNT 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01441 118 CDD nsLTP1 27 117 - -
Bva03g01441 118 PRINTS Plant phospholipid transfer protein signature 73 88 IPR000528 GO:0006869|GO:0008289
Bva03g01441 118 PRINTS Plant phospholipid transfer protein signature 28 44 IPR000528 GO:0006869|GO:0008289
Bva03g01441 118 PRINTS Plant phospholipid transfer protein signature 107 118 IPR000528 GO:0006869|GO:0008289
Bva03g01441 118 PRINTS Plant phospholipid transfer protein signature 89 106 IPR000528 GO:0006869|GO:0008289
Bva03g01441 118 PANTHER - 6 117 IPR000528 GO:0006869|GO:0008289
Bva03g01441 118 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 14-RELATED 6 117 - -
Bva03g01441 118 Gene3D - 26 118 IPR036312 -
Bva03g01441 118 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 27 118 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01441 Bva-Chr3 13703078 13703434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01441 6 118 Acyl Lipid Metabolism Gene Families AT5G59310 35.398 1.84e-12 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01441 - - ccaj:109812699 165.236
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01441 03 13703078 13703434 Bva03g01441 03 13703078 13703434 ECH