Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01426 ATGGCGGACGTGAACTCCGATGATGGGCTGCCGCCAGGTTGGACTGTGGaagtgaaaatgagaaaaaatggTAAGAAAGACAAGTACTACTTTGCCCCCTCGCGTGGACTTAAATTCAGTTCCAGGGCAGAAGTTGCTCGCTATCTCAACAATATTCAGGATAAAGTCAACATCAAGAGGGTTTCAGAAAATGTGGTAGTTGAGAAAGTTATTGCAGAAGGGTTACCACCTGGATGGATCAAAAAGACCAGGATTACAAATAAGGGTGATACAGTCAGAAAAGATCCGTTTTACATTGATCCTGTAAGTGGATATGCATTCTGCTCCATGAAAGATGTTGCTCGCTATTTAAAAACTGGGGAGATAGGGAGGAATGCATtcaagacaaaagaaaaaggcatcaATGACATGGAGttagaagatgaaaaattcaCTTCACCAAGTGcatcaaagaaacaaaaattatcagTAAGCCGAGCAAGACAACAGGTTATCATGGTCCAAAGTTCAAATTTGGATGGAATAGTTGATGACCAACAGATTCCCAAACCTGCATGTGCGGGAGATCACTGTTTGGATCAGAAAGAAGGGAAGGTTGGTTCAGTTGAGAGTGCTTCTTATTCTGCAGATGGGGTTGCCCCCAAGAAGGAACTTCCTGAAAGTCCACAGACAAGATGTGAAGCTGGAAAGGTCCAAAATCACCGAGGCAAACACAAGAACCAAAAAGAGATGAACTTGCCTCGCCGTGCTTCAAAGCGTCTAGCTGGGATTAAAGCTGACCCGGTCCCGGAGATAAAACTGAGAGCACCTCGAGTTGCTACAAAACAATCAAGTGAAGGAGAAGCGATCAAAAATGAGGATAAATTAGATGGCAGTTTACCTGATGGAGCAGTAAAACAGCTTAATTCATGTGAAGATAGATCAGAAACTAAATGCAAATTTGTCAATTCCACAAAAACAGTAGAGTCATCAAAGTCTGGTCAGAAAAAGCATCCTTATCGGAATTTGTCTACTCAAGAAAAGCCTGAGAAGGCTTTACAAGAGCTCAAAAGTGACAAGGATCAACCATGCTTTTCTCTTCACAACCAAGCTGCTCTCAAGGAGAAAATCAGAGACCTTGAAAATGGAGACAAGTTTGATTTGATGTTAGATGACTCCCTTGACTTGCCCCTGCGAGAGATAATAACAGACCCATGTATTGCATTTGCAATACAGATTCTCACTGGAATAACATTCGATACATCCACAAGCTCTCAAATTTCAACTGAATCGAACAACATCAATGCTGCTGGCGAAGGGCATCTTAAGAAAATGGATATTGAAAAGCAAGGATGCAATTTGTCTTTGCCATCAGAAAACCTTGCCATTCCAGAAGAATGTGCCGGAGATGCCGAAACTCATTGCAAAGCCAGTGAGAAATCAGGCTCTTGTTCTGACATGCCGGTCGAGGTTTCATGGATGGACCCCTGCATTGAATTTGCAGTAAAAACCCTCACCGGCAACATTCCGTTGGACTATGATGCAAATATGCAGCAGGATTGCCGTCAACAGCAATTTGGCTCATCAAATGCCCAAGGGCACTGTGAGATGGGCTTGTACCAGGCTGACTATTATGGCAGCCAATACTTAGGTATCCAAAATACGGGGTTCAAGCAACAGTCTTTTGCGGAGCCAGCATTAGGAAATGCAAGGAATTTTGGCGTGGATAACTCTGCTGGACCCAGAATGTCCCAATGTGGTGAGGATAGAAAGAATGGATGCCAGAGGTG 1769 0.4178 MADVNSDDGLPPGWTVEVKMRKNGKKDKYYFAPSRGLKFSSRAEVARYLNNIQDKVNIKRVSENVVVEKVIAEGLPPGWIKKTRITNKGDTVRKDPFYIDPVSGYAFCSMKDVARYLKTGEIGRNAFKTKEKGINDMELEDEKFTSPSASKKQKLSVSRARQQVIMVQSSNLDGIVDDQQIPKPACAGDHCLDQKEGKVGSVESASYSADGVAPKKELPESPQTRCEAGKVQNHRGKHKNQKEMNLPRRASKRLAGIKADPVPEIKLRAPRVATKQSSEGEAIKNEDKLDGSLPDGAVKQLNSCEDRSETKCKFVNSTKTVESSKSGQKKHPYRNLSTQEKPEKALQELKSDKDQPCFSLHNQAALKEKIRDLENGDKFDLMLDDSLDLPLREIITDPCIAFAIQILTGITFDTSTSSQISTESNNINAAGEGHLKKMDIEKQGCNLSLPSENLAIPEECAGDAETHCKASEKSGSCSDMPVEVSWMDPCIEFAVKTLTGNIPLDYDANMQQDCRQQQFGSSNAQGHCEMGLYQADYYGSQYLGIQNTGFKQQSFAEPALGNARNFGVDNSAGPRMSQCGEDRKNGCQR 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01426 589 MobiDBLite consensus disorder prediction 566 589 - -
Bva03g01426 589 MobiDBLite consensus disorder prediction 270 294 - -
Bva03g01426 589 Gene3D - 2 60 - -
Bva03g01426 589 SUPERFAMILY DNA-binding domain 72 123 IPR016177 GO:0003677
Bva03g01426 589 MobiDBLite consensus disorder prediction 230 244 - -
Bva03g01426 589 MobiDBLite consensus disorder prediction 324 341 - -
Bva03g01426 589 Pfam Methyl-CpG binding domain 70 121 IPR001739 GO:0003677
Bva03g01426 589 Pfam Methyl-CpG binding domain 9 58 IPR001739 GO:0003677
Bva03g01426 589 SMART TAM_2 3 66 IPR001739 GO:0003677
Bva03g01426 589 SUPERFAMILY DNA-binding domain 7 55 IPR016177 GO:0003677
Bva03g01426 589 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 1 70 IPR001739 GO:0003677
Bva03g01426 589 Gene3D - 61 166 - -
Bva03g01426 589 MobiDBLite consensus disorder prediction 205 244 - -
Bva03g01426 589 PANTHER OS04G0193200 PROTEIN 1 581 IPR038945 -
Bva03g01426 589 MobiDBLite consensus disorder prediction 317 341 - -
Bva03g01426 589 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 13 1 581 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01426 Bva-Chr3 13599760 13604596 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01426 - - gsj:114388973 487.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01426 03 13599760 13604596 Bva03g01426 03 13599760 13604596 ECH