Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bva03g01415 | ATGACAGAGGAGGCACCCAAAAAGCCGGACTTCGAATCCCCGTCGGAGCCCCCACCAGCTCCGGCTCCGACGGAAGTCCTCCCTCCACCTGAACCTAAGCCTGTTCAAGAGGCTCCCAAGGATGTGGCTGAGGAGAAATCTGTAATTCCACCTCCTTCTGCTGCTGACGAGTCCAAAGCTCTTGTCATAGTTGAGAAGATTCCTGAAgaaaccaaagagaaaaaagaggatCCTGTCGATCGAGATGCAGTGCTTGCAAGAGTGGCAACTGAGAAGAGGTTGTCACTGATCAAAGCAtgggaagaaaatgagaagtcAAAAGCAGAGAACAAAGCTCACAAGAAGCTATCAGCCATTTCATCATGGGAGAACAGCAAGAAAGCTGCTGTAGAAGCTGAACTTAAGAAGATTGAgGAAGAActggagaagaaaaaggcagaatatgtggagaaaatgaaaaacagaaTAGCTCTGATCCACAAGCAAgctgaagaaaagaaagcaatcaTTGAAGCCCAACGTGGGGAAGATCTTCTCAAGGCCGAGGAGATAGGGGCCAAGTACAGAGCAACTGGAACAGCTCCTAAGAAACTCCTTGGCTGTTTCTA | 608 | 0.4079 | MTEEAPKKPDFESPSEPPPAPAPTEVLPPPEPKPVQEAPKDVAEEKSVIPPPSAADESKALVIVEKIPEETKEKKEDPVDRDAVLARVATEKRLSLIKAWEENEKSKAENKAHKKLSAISSWENSKKAAVEAELKKIEEELEKKKAEYVEKMKNRIALIHKQAEEKKAIIEAQRGEDLLKAEEIGAKYRATGTAPKKLLGCF | 202 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bva03g01415 | 202 | Pfam | Remorin, C-terminal region | 92 | 197 | IPR005516 | - | |
| Bva03g01415 | 202 | Coils | Coil | 127 | 154 | - | - | |
| Bva03g01415 | 202 | PANTHER | REMORIN 1.4 | 1 | 202 | - | - | |
| Bva03g01415 | 202 | MobiDBLite | consensus disorder prediction | 12 | 36 | - | - | |
| Bva03g01415 | 202 | PANTHER | OS02G0117200 PROTEIN | 1 | 202 | - | - | |
| Bva03g01415 | 202 | MobiDBLite | consensus disorder prediction | 1 | 60 | - | - | |
| Bva03g01415 | 202 | Pfam | Remorin, N-terminal region | 40 | 88 | IPR005518 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bva03g01415 | Bva-Chr3 | 13523887 | 13526067 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bva03g01415 | - | - | sind:105166669 | 217.624 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Bva03g01415 | 03 | 13523887 | 13526067 | Bva04g01139 | 04 | 7655400 | 7657932 | ECH | |
| Bva08g00185 | 08 | 918015 | 919397 | Bva03g01415 | 03 | 13523887 | 13526067 | ECH | |
| Bva11g02102 | 11 | 17448639 | 17450536 | Bva03g01415 | 03 | 13523887 | 13526067 | ECH | |
| Bva03g01415 | 03 | 13523887 | 13526067 | Bva03g01415 | 03 | 13523887 | 13526067 | ECH |