Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01412 ATGCGAACTCGCTTCCTCAACATCGACTACTTCAGCCTCGCTCCACGCCAGTCCAGAGAAACCCTAGCCTTCCTCCACCTCCCTGTCCCTCTCCTCCCTTCTACTCTTCCATCCGCCATTGAAGATCACCTTCCATTTGATTCTCTCCTCAATGTTCCTCTTCTCATCGAGAGGTTGCCTATCGATGCTGCTCTGTCTAAGTTCCTCTCTTACGTGCTACCTCAAAGCATTGATGTTGATTTTCAAGATTCCCAGGCTTCCAGGGCATCTGGAGATAAAGAATGCTCCTCATCCTTCAGCATTGGAAGCGTTGGAAATCGGATTTCGGAGGAGAGTGAAGGGAGTGCTCTAAGTGATAAGAATAAAAGTGTAGATAAAATTATCCAATTCGAAGCACCTGAACAACTACTCTTGGAAAATGCTTGGTTCCCTGAAGAGGAGATAATGCAAATACTGTCTGAATCTGAAGTCCCAGGCGTTGAAGTTAATCTGGAGATGCTCAAGCCTCAGTGCTTGATGCAGTACACTTGTGAGGTTCTGGAATCAATATCTTCAGTTGACGTTACTCCAGAGTACTATGCAGCGAAAGTTGGTTACTCTTTAGAAGATAATATTTCTGTCCAGAACCTGCAACACACTGTCCAAAGCAAATTTCCAGTCCTGGAAGTGGATGAGGAAAGTCTGGGAATTCTGACATGCTTGGCTATGGAAAAAAGTGTTGGTTCACATTTTGATGATATAAGGCCTCAAAATTTGGACACCAAATATCACTTTGTCATTGAGGGCAAGGAACTTTTGGGTTCTATGAAGTATAATATAATGGACTTTTTTTCAGTTGACTGTCTATCAAAGCAAAGCCTGGTATTATCAGATATACTTCCTGAACGGGAGTTTATAATTATGCCTGAAACTGATCACGATCAGAAGAATTCTGTCCTGCAAGGGGCTGCACAGGCTGATAGTCCCTTGTTAGTGAATGAAGTTACCTTTGAGGAATTTATGTTCCTTGAAGAGGACTTATTTCAAACCTTTGAAGTCTTCTATATGACACAAACATTAGATGATCCGGAAACAAGTGAGTGGATGTTTAAGAAGGACTTCAACTTCaagaattttgatgaattgGTTGTTGGTAGTGAGATGGCACTAATAGAtgacaaatttaaatcattgcCAGTCCCTGTTATGGCTGATCATGGAAAGATGATATCCATGTATGAAATAATTGGAGAGATGCTTTACAACTTGAAGACTCAACCCTTATCTGCATCTGATGGAATATACTTGAACTGGGATTTACTGGAAGAAGATAAATGCAATTCCGAATTTTATCACTGTTGTCAGAATTCATGGGCCAAGATAGATCTGAAAAACATAGGTTTAGATGGACCATCTTTGGATGATGGAAGAGTGGTATTTGATCTTGTTTTCTCAATTGATGCTATTGGTGAATGTGACAGAAAAGCAAGCGAAGAATTACAAaagttgctttctttttgtccATCTCAGCTTAACGATCATACAATGGGAGCTACTTTATGCAAACCATTGGATGATAGGTCTCCTAAACAAGGAACTGGAGTGCAATTAGCTGAAAGAAATGCTGAGAGGGCTTCGTTGTTATTCAAGTCCATGTCAGATGTCAGCAATCTTGACTATTTCTTAAACCCTCAGAAAGCAACTGCCAAGGGACATTGTAACGTCACTGTAGAATCAACTGATGCTAATGTTAAAGTTCCAAAACTGACATCCACTGACATAAACGCATCATGTGGTTGCACTGGTCTGCAATTACATAGAGTTAAGTTGTCCGAAAATATGGTTTCCATTATTgggaattttgaaaaaagttaCCTGGTCATTTTGCAGAGTGAAACAGAGCTGATAAAGACATATAACCCAGCTgttgattattttgaattgCTGAGTCTTCCTAAACATAAGCTGATGCAATTCCATGGAAATGGAAACAATATGGCCTTTATTGTGCTATGCGCAATTAAACAGGCTGCGTGGTACTTATGTTTCTACGGCCTTCATCCAGCAGAGATGTATGTGGACaaattatgtcaaaatttGGCCTACTTGAAATCAAGATTAGGCTACCTCCAATTATTGATTAAGGATAAAATCAGGAAGGTTGGCGACAAAATCAATGCAGTTCATCCTGCACTAACAGTTTTTGAGGAAATTTTACGATCAGACATCGAAAGGAAGGATCTGAAAGTGTTGATTGTGGCTGAAGAAGCTTTCTGGTGGTCATTGAAAAGTCTCCTTCTGTCCTTGGGAATGTCACCTAATGTACTACATGGAAACCAGCCATATGAAGACATGGTTAAGGGCGCAGATTCCAAAATGAAGGACCTTCTGATTTCTGATTGCTTGATAATCTCCTACAAGCATGTTTCTTCATTGTTTCCATTCAACAAATTCGGCATTATCTTGGAATATGGAGGTCCGAACTGCTCATCTAGAATATCAGATCTTTTGCCAAACTCCCATGGATTCCCTCAACTTCACTTTGTAAATGTGGAATTGGATGGCCATGATGCTTTCAAAGCACTTTGTGAAGGTGTTGAAATGCCCCGCACAACTGAACTATTGATGGAAAATGAGTCTAATTCAATTTTCGATCCCAAGGCAAGCATGGCGAATCGGAAGCTAGGGAAACTACTGAACTTTTGTCCTGTAGAGCAAAACTACGATATAAGATCTTCAGAGGCTGCAGAGGAAGTAGACGATATAAGATCTTCAGAAGCCACAGAGGAAGTAGACCGTTCTGTACCCCCAGCGATTCAAACATTTAGAAGTCATAATTGTCATCAGAGCTTGGAGTCGTTCCCTGAAGCAGTTATTGTCGTGAATACTCAAAATACAGATAAGGAAATGATAATGTCTAGAAGAAGCACTTACCAAGTAATTCTTGAAATGGAGAAAGGAGGGACTCAAGTTGTTGAACGTGATCTGGATTTGCCTGTGGATATTGTAATTAGTTCAGCAATTTGCTTGGTGTGGTATGATAACAGAAACCTTCGGAAGAAAGCAACTCCAATGACTGAAGCTTCTTCAAGCTTGCCTTTATGTATTGAGAATATTGCGACGAATGATTTAACATTGCTGAGTTTTTCCTTCAGCGGCTGCTTTCTGGTCTTTGAGGGAGATGTTAACTTTATTTCGACTGTAATGGAATCCTCAGATGGAATTCATGCTGCTGGAGCAAGCCTGGGAATTGATTTGCAGATCTTCTTTTCTTACTCATCTGAgttaacaaatgaaataatagtGAGCTGCATCAAGTATGTTACCAAATTGACAAGGGGCCTATATAATAGAATGCCCGAGTCAGTAACTATTGCAGAGTCATTTCTTACAGCATTTCCTTCAATAAATCCTTTAACGGCACATGCTATACTGTCTTCAGGGGCTGCACTTTGTGAATTTCTCAAGTGGTCACATGAACACAGGGTACGTGTTTTAGAAAAGTTCAATGTACCTGAACAAAGTATTGCTCTATTTAGTGCTTTCTGCAGATACGGGGAGCGGGAGGATTCAAAATCCATAATGACAGACTGCTCATCTTCAGTATCTTCTGGTCCAGACTCATACAGATGTCAAGTTGactatgaaagaaaaagaaaaaagaaaataagtagtCCTCAGGAAGATGAACTATGTTTTGATGAACTGTTGCAATTTGAACCAGTAGACCAAGTGTTTGATGGCTTCCTGGATTCTTCTACCCTGTCAAAGCATTGTAGTCCTGGTATGACAAAAGATACGGGCCTTTTGTTTGGTCAAAAGCAAGGATTCGATGTGACTACAATCAGAAAACCTTCAGTTTCCCGGCCATCATGTGATTCACAGAATTTTAAAGCTCCCGAAAAATTAGAGCAGCTAAACAGGTCCTCCTCGTCTTTGAAAGATAAAGCACAGGCTCCATATGACACACTGAATACAGATATGATCAGCAAAAATTTGGCTTGCCATGGTCTTGGTAATTCTAAGAAGGTGCATGAGGACATTACAGGCAAGTTTATTGACTTAACTGATATTCCTGTACGAGATAAAAACTTCTCTTTCTTGGATGACTCCATGGATTTTCTAAGTTTGGTGACTGAGACAGAAGAGGATCACatgagaaagaataaaattgctAGAAGATTGTCATTTGATAAGGGCAAGCATCCCGTGGCCAACACTTCAAATATCTGGAGTTCTTTAAAGGATGCAGGAACGGAAGTTGAAAACCATCCAGAACCATATTTTGTAAAGGATGACTTGCCTCTTGATGTTAGGCACAGTGAAAAAAATTCTGACGAGGGTTCAACTCAGGTTACCATGAGAAACTTACAAGGATTACCCTTCCAAGAGGAGATGTCACATTTGGGTGAAACTCCACTTTCACGTGCTCTCCGGTCTGCCAGTCCATTAAAAAACTCACCATGGACaatagaatttattaatagaataaaagaaaagagcaaaTTACGTCAAAAACCATTTTCACGCGAGAAAGCTGCTCCTAGTTTTGGGGATTCCGGGAATGTGTGTAGAGTTCCTAAGAGAAGAACTCCTTTTATTTCTGAATTCTTCAAGTACCAAGGAAGTAGACCTCATGGAAATATACCCGAAAAGAAAAGGCAGAAGCAATCTGTGCAATCAACAAATGCAGTCAAGaatggaaaatatttagaCTTTCTTCCTCCCACTTGGACACCGAATGATAAAAAAGCAAGGAAGACGCTGACTTTTGCAACGAACGATAGGGGAAGCCAAACTAAGCTCGTTTGGAGTGACGGAACTCTAGATTCGACCAAGTTACGGTATCAGACGCAATA 4838 0.3902 MRTRFLNIDYFSLAPRQSRETLAFLHLPVPLLPSTLPSAIEDHLPFDSLLNVPLLIERLPIDAALSKFLSYVLPQSIDVDFQDSQASRASGDKECSSSFSIGSVGNRISEESEGSALSDKNKSVDKIIQFEAPEQLLLENAWFPEEEIMQILSESEVPGVEVNLEMLKPQCLMQYTCEVLESISSVDVTPEYYAAKVGYSLEDNISVQNLQHTVQSKFPVLEVDEESLGILTCLAMEKSVGSHFDDIRPQNLDTKYHFVIEGKELLGSMKYNIMDFFSVDCLSKQSLVLSDILPEREFIIMPETDHDQKNSVLQGAAQADSPLLVNEVTFEEFMFLEEDLFQTFEVFYMTQTLDDPETSEWMFKKDFNFKNFDELVVGSEMALIDDKFKSLPVPVMADHGKMISMYEIIGEMLYNLKTQPLSASDGIYLNWDLLEEDKCNSEFYHCCQNSWAKIDLKNIGLDGPSLDDGRVVFDLVFSIDAIGECDRKASEELQKLLSFCPSQLNDHTMGATLCKPLDDRSPKQGTGVQLAERNAERASLLFKSMSDVSNLDYFLNPQKATAKGHCNVTVESTDANVKVPKLTSTDINASCGCTGLQLHRVKLSENMVSIIGNFEKSYLVILQSETELIKTYNPAVDYFELLSLPKHKLMQFHGNGNNMAFIVLCAIKQAAWYLCFYGLHPAEMYVDKLCQNLAYLKSRLGYLQLLIKDKIRKVGDKINAVHPALTVFEEILRSDIERKDLKVLIVAEEAFWWSLKSLLLSLGMSPNVLHGNQPYEDMVKGADSKMKDLLISDCLIISYKHVSSLFPFNKFGIILEYGGPNCSSRISDLLPNSHGFPQLHFVNVELDGHDAFKALCEGVEMPRTTELLMENESNSIFDPKASMANRKLGKLLNFCPVEQNYDIRSSEAAEEVDDIRSSEATEEVDRSVPPAIQTFRSHNCHQSLESFPEAVIVVNTQNTDKEMIMSRRSTYQVILEMEKGGTQVVERDLDLPVDIVISSAICLVWYDNRNLRKKATPMTEASSSLPLCIENIATNDLTLLSFSFSGCFLVFEGDVNFISTVMESSDGIHAAGASLGIDLQIFFSYSSELTNEIIVSCIKYVTKLTRGLYNRMPESVTIAESFLTAFPSINPLTAHAILSSGAALCEFLKWSHEHRVRVLEKFNVPEQSIALFSAFCRYGEREDSKSIMTDCSSSVSSGPDSYRCQVDYERKRKKKISSPQEDELCFDELLQFEPVDQVFDGFLDSSTLSKHCSPGMTKDTGLLFGQKQGFDVTTIRKPSVSRPSCDSQNFKAPEKLEQLNRSSSSLKDKAQAPYDTLNTDMISKNLACHGLGNSKKVHEDITGKFIDLTDIPVRDKNFSFLDDSMDFLSLVTETEEDHMRKNKIARRLSFDKGKHPVANTSNIWSSLKDAGTEVENHPEPYFVKDDLPLDVRHSEKNSDEGSTQVTMRNLQGLPFQEEMSHLGETPLSRALRSASPLKNSPWTIEFINRIKEKSKLRQKPFSREKAAPSFGDSGNVCRVPKRRTPFISEFFKYQGSRPHGNIPEKKRQKQSVQSTNAVKNGKYLDFLPPTWTPNDKKARKTLTFATNDRGSQTKLVWSDGTLDSTKLRYQTQ 1612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01412 1612 MobiDBLite consensus disorder prediction 1535 1559 - -
Bva03g01412 1612 PANTHER PROTEIN SHORTAGE IN CHIASMATA 1 1 1605 IPR038824 GO:0007131
Bva03g01412 1612 PANTHER PROTEIN SHORTAGE IN CHIASMATA 1 1 1605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01412 Bva-Chr3 13493713 13508770 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01412 - - gmx:102663374 1633.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01412 03 13493713 13508770 Bva03g01412 03 13493713 13508770 ECH