Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01398 ATGGAGGTGGTGCGGTTCTCGTTTAATGTCATGGGAGATGCGATTAGACAACCAGATGACCTCTCTGCAGACGAGAAgGTTCTTATGGCTCGTGCTAGGAACTTTAATTCTAGCAATAATGGTGGTAGTGTGGCTGGTGGGAAGCAAGAATGTGAGCCAAGGCAACAGGATAACTCTCTGCACAGTTCCTTGGGGGTTCCTAGGGTGGAAGATAAATTTACTTCTATATCTGATGTAAGTTCTGGGAGGGGGCTGATTGAGTCCTCAACCAATAGCAGTAGAGCTAGAAAGCACGAGGAGAAAGAGCCACTTGGAAGTTGGAAGGTAAAGTGCAGCAAAAAGGACCAAAACACACTCTTGAACTTCAAACGAGGAGTGATCGATCCATCAGGCATGCTCGCTTCGTGGTCGGTCGAACAAGATTGTTGCCAATGGAAGGGAATCGTTCGTGACAGCATCACAGGCAGAGTCACAGGGCTGAGTCTTCCTTGTTCTACACATCTCTCTCCTTATACTGAGAAAGAGGACAAATCACACTGCCTCACAGGTGAAATCCACCCATCTTTGCTGCAACTTGAATTCTTAAATTACTTGAATTTGAGCCACAATGACTTCAAAGCTATCCAATTTGATTCTGTTTCACTTCCATGGTCGTGCGGGGATTCCTCCAACTCTAACCTTCAATACCTTgatttatcatataataatgatCTTCACATAGAGAATCTTCATTGGCTCTCTTGCTTTTCCTCATTGAAATATCTCCAGCTCAGTGCTATTGATCTTCACAGGGAAACTAGCTGGCTTCAGTCATTAACCATGCTTCCTAAACTTTCAGAACTATATTTGAAGAGTTGTCACCTAGGAAAGATATACCCTTCTCTTGAATATGCAAATTTTACTTCACTTAAAGTTCTTGATCTATCCCGCAATGGCTTTAACTCTGAATTTCCTAAATGGTTGTTCAACCTTAGTTGTGACATCTCAAAAATAGATCTTCACACTAATCTTTTACAAGGCCAAATACCTCAGGGACAGGCACTGTTAAATCTTCGGAATTTGAAATTCTTGCGATTAACTGAGAATAAGCTCAAGGGATTGATTCCAGATTGGTTAGGCCAACTTGAAAATCCACAAGAACTTTTTCTggatcataatttattttctggtcCTATTCCCACAGTTTTGGGAAATCTGTCATCCTTGATTACCTTAGATCTAAGCTCAAATCATTTAAATGGAAGTGTTCCAGACACTCTTTGGCAACTCTCGAATTTGGAAACCTTAGTAATTGGATGCAATTTCTTGACAGGAGTTGTGTCTGAAAGGAACTTTGTCAAactccaaaatttaaaacagttATATTTAGGCTCGCCATCCCTCACCCTTGATTTCAATTCCCAATGGATTCCCCCTTTCCAACTTGTTTCTATTACTTTGCAATACTTGGGTGGTAAGTTTCCTGCATGGATATATACACAGAGATCTCTTGTGTACCTAACCATATGTCACTCAAGCATTTCATTTAAATCCCAAGACAAGTTTTGGAACTTTGCAGCTCAACTTGAATTATTCCATTTATCCCACAACCAAATTGAAGGCAATTTGTCAGATGTGGTTCTACAGTCTAGAATCATATATGTGTCATCAAATAAGTTGAGAGGTGGCCTCCCTCAAATATCACCAAACGTGACTGTGTTCCGCATGGACAACAACTCCTTGTCAGGACCCATTTCTCCTCTCTTATGTCCAAAGATTAATGGGAAATGGAATTTAATGTACTTGGACATCTCCCATAATCTTTTATCAGGAGAGTTGCCGGACTGTTGGATGAATTGGAAATCTTTGGTCCATGTTTACATGCGTTACAATAACCTAACTGGAAAGATTCCCCTCTCAATGAGTTCATTATCTAATCTCAAGTCATTAGATCTGCATAATAATAACTTGTTTGGAGGTATACCTGGCTCATTGAAAAACTGTCAAAAGCTGCAGATTCTTGATCTTGGTGAAAACAAGTTTTCTGGAAATATACCCAACTGGATAAGGCATAGCATGAAAGTTCTGCGATTGAGATCCAATCAATTCAGTGGTAGAATTCCTCAAGAGATATGCCAGCTTTCATCCCTCATAGTCTTGGATTTTGCAGATAATAGAATATCAGGACCAATGCCAAACTGCCTGCATGATATCAGAGCTTTGGTCTTCAAAAATGCTTCACAACAGTTTCTTGGCTTCCCTGTTGAAAATACTACATACACCTTCATATACACTCTTGCATTACCAAGCAAAGGCCAACAAAGAAATTACCAAAGCAATCAAGAATTTATGCGTGTGATTGATCTTTCTCAAAACAATCTGTCTGGATTAATACCTCTGGAAATATTTACCCTCGCTGCATTGCAATCCTTGAACTTgtctcaaaatcaattaataggAGAGATACCAGAAGATATTGGCAACTTGAAACAATTAGAATCTCTAGATCTCTCAAACAACCATCTTTTTGGTGAAATTCCTCAAAGCATATCTATCATGTCTTTTCTTGGTGTTTTGAACCTGTCATTCAACAATTTCAGTGGTCAAATCCCAACAGGAACGCAACTCCAAAGTTTTGATGCACTAAGCTTTATTGGCAATCTTGAACTATGCGGAGCTCCTCTTACAAAGAATTGCACAGAGGAGAAAAATTCCAACAGTGCAAAACTGAAGGCAAAGAATGAGGATGACTCTGGATTTCTGTCATGGTTGTATATTGGTTTGGAAGTTGGTTTTCCCACAGGCTTTCTTGGAGTATGTTATGTTCTTTACTTCGGCAAGACATGGTGGCATGCTTCTTTATGGAGATCCTG 2852 0.3896 MEVVRFSFNVMGDAIRQPDDLSADEKVLMARARNFNSSNNGGSVAGGKQECEPRQQDNSLHSSLGVPRVEDKFTSISDVSSGRGLIESSTNSSRARKHEEKEPLGSWKVKCSKKDQNTLLNFKRGVIDPSGMLASWSVEQDCCQWKGIVRDSITGRVTGLSLPCSTHLSPYTEKEDKSHCLTGEIHPSLLQLEFLNYLNLSHNDFKAIQFDSVSLPWSCGDSSNSNLQYLDLSYNNDLHIENLHWLSCFSSLKYLQLSAIDLHRETSWLQSLTMLPKLSELYLKSCHLGKIYPSLEYANFTSLKVLDLSRNGFNSEFPKWLFNLSCDISKIDLHTNLLQGQIPQGQALLNLRNLKFLRLTENKLKGLIPDWLGQLENPQELFLDHNLFSGPIPTVLGNLSSLITLDLSSNHLNGSVPDTLWQLSNLETLVIGCNFLTGVVSERNFVKLQNLKQLYLGSPSLTLDFNSQWIPPFQLVSITLQYLGGKFPAWIYTQRSLVYLTICHSSISFKSQDKFWNFAAQLELFHLSHNQIEGNLSDVVLQSRIIYVSSNKLRGGLPQISPNVTVFRMDNNSLSGPISPLLCPKINGKWNLMYLDISHNLLSGELPDCWMNWKSLVHVYMRYNNLTGKIPLSMSSLSNLKSLDLHNNNLFGGIPGSLKNCQKLQILDLGENKFSGNIPNWIRHSMKVLRLRSNQFSGRIPQEICQLSSLIVLDFADNRISGPMPNCLHDIRALVFKNASQQFLGFPVENTTYTFIYTLALPSKGQQRNYQSNQEFMRVIDLSQNNLSGLIPLEIFTLAALQSLNLSQNQLIGEIPEDIGNLKQLESLDLSNNHLFGEIPQSISIMSFLGVLNLSFNNFSGQIPTGTQLQSFDALSFIGNLELCGAPLTKNCTEEKNSNSAKLKAKNEDDSGFLSWLYIGLEVGFPTGFLGVCYVLYFGKTWWHASLWRS 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01398 950 SUPERFAMILY L domain-like 137 478 - -
Bva03g01398 950 Gene3D Ribonuclease Inhibitor 440 896 IPR032675 -
Bva03g01398 950 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 108 381 - -
Bva03g01398 950 Pfam Leucine Rich Repeat 639 661 IPR001611 GO:0005515
Bva03g01398 950 Pfam Leucine Rich Repeat 801 822 IPR001611 GO:0005515
Bva03g01398 950 Pfam Leucine Rich Repeat 824 844 IPR001611 GO:0005515
Bva03g01398 950 MobiDBLite consensus disorder prediction 34 64 - -
Bva03g01398 950 SMART LRR_typ_2 822 846 IPR003591 -
Bva03g01398 950 SMART LRR_typ_2 192 215 IPR003591 -
Bva03g01398 950 SMART LRR_typ_2 637 660 IPR003591 -
Bva03g01398 950 SMART LRR_typ_2 300 324 IPR003591 -
Bva03g01398 950 SMART LRR_typ_2 707 730 IPR003591 -
Bva03g01398 950 SMART LRR_typ_2 351 374 IPR003591 -
Bva03g01398 950 SMART LRR_typ_2 798 821 IPR003591 -
Bva03g01398 950 SMART LRR_typ_2 399 423 IPR003591 -
Bva03g01398 950 MobiDBLite consensus disorder prediction 81 103 - -
Bva03g01398 950 Gene3D Ribonuclease Inhibitor 111 420 IPR032675 -
Bva03g01398 950 PRINTS Leucine-rich repeat signature 822 835 - -
Bva03g01398 950 PRINTS Leucine-rich repeat signature 402 415 - -
Bva03g01398 950 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2-RELATED 108 381 - -
Bva03g01398 950 SUPERFAMILY L domain-like 544 888 - -
Bva03g01398 950 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2-RELATED 350 945 - -
Bva03g01398 950 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 350 945 - -
Bva03g01398 950 Pfam Leucine Rich repeat 223 236 IPR001611 GO:0005515
Bva03g01398 950 Pfam Leucine rich repeat N-terminal domain 113 148 IPR013210 -
Bva03g01398 950 ProSiteProfiles Leucine-rich repeat profile. 226 247 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01398 Bva-Chr3 13397904 13402700 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01398 111 898 Miscellaneous Gene Families AT1G74180 29.234 7.90e-75 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01398 - - ccaj:109795187 913.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01398 03 13397904 13402700 Bva03g01398 03 13397904 13402700 ECH