Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01397 ATGGCGAACTCGGCATCTGGAATGGCTGTGAACGATGAATGCAAACACAAGTTCCAGGAGCTAAAAGCGAAGAGGAAGTACCGTTTCATTGTGTTTAAGATTGAGGAACAAGAAGTGGTGGTGGACAAAGTTGGGGGTCCAGACGAAACCTATGAAAATTTTACTGCATCTCTGCCCTCAAATGAGTGCCGTTATGCTGTCtatgattttgatttcacCACCGATGAGGACATCCAGAAAAGCAAGATTTACTTCATTGCATGGGCTCCGGATATATCGAAAGTGAGACAAAAAATGGTGTATGCTAGCTCCAAGGACAGATTCAAGAGGGAGCTTGATGGAATTCAAGTTGAATTACAGGCAACAGATCCTAGTGAAATGAGCCTTGATACCATAAAGGCCCGGGCAGTTTG 413 0.431 MANSASGMAVNDECKHKFQELKAKRKYRFIVFKIEEQEVVVDKVGGPDETYENFTASLPSNECRYAVYDFDFTTDEDIQKSKIYFIAWAPDISKVRQKMVYASSKDRFKRELDGIQVELQATDPSEMSLDTIKARAV 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01397 137 Gene3D Severin 1 137 IPR029006 -
Bva03g01397 137 Pfam Cofilin/tropomyosin-type actin-binding protein 14 134 IPR002108 GO:0003779
Bva03g01397 137 SUPERFAMILY Actin depolymerizing proteins 3 135 - -
Bva03g01397 137 ProSiteProfiles ADF-H domain profile. 7 137 IPR002108 GO:0003779
Bva03g01397 137 PANTHER COFILIN-RELATED 2 136 IPR017904 GO:0015629|GO:0030042
Bva03g01397 137 PANTHER COFILIN/ACTIN-DEPOLYMERIZING FACTOR-LIKE PROTEIN 2 136 - -
Bva03g01397 137 CDD ADF_cofilin_like 6 136 IPR017904 GO:0015629|GO:0030042
Bva03g01397 137 SMART adf_2 12 137 IPR002108 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01397 Bva-Chr3 13393619 13395870 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01397 K05765 - ahf:112779196 236.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01397 03 13393619 13395870 Bva04g01150 04 7744453 7746550 ECH
Bva03g01397 03 13393619 13395870 Bva03g01397 03 13393619 13395870 ECH