Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01389 ATGGTTACTCAGAATGGCATCAAATTCGCGGTTCACCTCATAACCAATCACTTCGGCAATCTTGTTTCTAAAGTATGTGAAAATCTCCTGAAGAGGGGACCCCTCAGTTTGGAAAAGTTGGTTAAGTTTACTGAACTTACCAAGGAGCAAGTCAAGAACTCCTTACTTGTGTTAGTCCAGCACAACTGTGTTCAAGCTTTTACCTTTGACGAAGGTGATGACAGAGAGGGAGCAAAAGCTATTACAGAATACGTGGCCTTATTTGATAACATAATCCATCGACTGCGATTTCCCAAATTTTTGGAGATTGTGTCGCAGGAACTTGATGATGAATGTGTAGAACTTCTTGAGGGATTGCTTCGTGATGGTAGGCTTACATTGAAACAGATGGTTGATAGGGCAAGTCAAGGAAAAGAAAATCCTGTGGCTATGGATTTTGTACAAGAGAACCTCCGCAAACTTTTGGCAGTTCGATATGTTGAACGCTGCCCTGACCCTGAGCCATTCGTTTCTAAACCAGTCAAAGAGGAAACTACAAGAAAACGAGGTGCCAAGTCTGCCAAGACAGATGTAGTACCACGACAGACCATGGAACAACTCATTATGGAGGCGGCAGTGCTAGGGGAAGGAATCAGATTTTCGCTCCCGTCAAATACAGAATCCAATGCTGATGGAGAAACGAATGCAGATGGTTCTCCCATGATAATTGATGGCACATCACAAGCAGAGTCAACTCTTTGGCGTGCAAATTTTGAGGAATTTATACGTCGTCTTAGGCGCAAGGCATTGATTGAGAACGTAAGAGCACGACTGGATGATGGAGCTGCTGTTATCTTGAGTGCAATATTGGAGTCAACTAAAACAGCagagaaaaaagtgaaaatggaGAATTCAGTTCCCATGTCCCTGGATACTATTTTCACAGAAGTGATGAAGACTGAATTTGGTCGGACTATGACCATAGATCGTGTGAGAGCTTCCCTTATCCAGTTGGGTTGTCCGTCGAGAATGCTAGAAGATTCATATAGTATTGATTTGAAGAATGTTCTTGAATTAGCTCGAAATGAAGAGGTTGAGTCAATTGTGTTGAAGAGATATGGAAAAGACGCCTACAGAATATTCAGGTTGCTGTCAAAGGCTGGTCGTCTTCTTGAGACAGATAAGATAGCAGATTCTACTTTTGTTGAGAAAAAAGATGCTCCAAAGATTCTATCTAGGCTATGGACGGATAATTACTTGCATATGGAGAAATTAGCTTTGTCCACAACCAAGTCATTTCTGTTGTGGAAAGTTAATAACCCTGTTCTTAGGGTACATGTACTGGATGAGATGTATCACGCTGCCTTAAATCTGAGCCTACGAATGGCTTTTGAGCAGGAAAAAGATGAAGAGCTCTTAACTATCCCCAAAGACAAGATTGTGGGGCCAATTCAGAAGAGATACAAAAGGCTACGAAATGTCTGGTTACTTCTGGGTTCATCACTGATGAAACTTGATGATGCTTTGATGCTTTTCCATGATTTCTG 1526 0.4135 MVTQNGIKFAVHLITNHFGNLVSKVCENLLKRGPLSLEKLVKFTELTKEQVKNSLLVLVQHNCVQAFTFDEGDDREGAKAITEYVALFDNIIHRLRFPKFLEIVSQELDDECVELLEGLLRDGRLTLKQMVDRASQGKENPVAMDFVQENLRKLLAVRYVERCPDPEPFVSKPVKEETTRKRGAKSAKTDVVPRQTMEQLIMEAAVLGEGIRFSLPSNTESNADGETNADGSPMIIDGTSQAESTLWRANFEEFIRRLRRKALIENVRARLDDGAAVILSAILESTKTAEKKVKMENSVPMSLDTIFTEVMKTEFGRTMTIDRVRASLIQLGCPSRMLEDSYSIDLKNVLELARNEEVESIVLKRYGKDAYRIFRLLSKAGRLLETDKIADSTFVEKKDAPKILSRLWTDNYLHMEKLALSTTKSFLLWKVNNPVLRVHVLDEMYHAALNLSLRMAFEQEKDEELLTIPKDKIVGPIQKRYKRLRNVWLLLGSSLMKLDDALMLFHDF 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01389 508 Gene3D - 2 86 IPR036388 -
Bva03g01389 508 Gene3D - 88 171 IPR036388 -
Bva03g01389 508 Gene3D - 346 432 IPR036388 -
Bva03g01389 508 Gene3D - 250 339 IPR036388 -
Bva03g01389 508 Pfam RNA polymerase III subunit RPC82 helix-turn-helix domain 10 67 IPR013197 -
Bva03g01389 508 MobiDBLite consensus disorder prediction 170 190 - -
Bva03g01389 508 PANTHER RNA POLYMERASE III DNA DIRECTED -RELATED 3 508 IPR039748 GO:0003697|GO:0005666
Bva03g01389 508 MobiDBLite consensus disorder prediction 170 188 - -
Bva03g01389 508 Pfam RNA polymerase III subunit RPC82 150 323 IPR008806 GO:0003677|GO:0006351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01389 K03023 - gmx:100803947 653.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01389 03 13322063 13331020 Bva03g01389 03 13322063 13331020 ECH