Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01379 ATGTCAATCATATGTGGCCTGCCTCTGGTTGAGTGTGTGTACTGTCTGGCATGTGCTCGTTGGGCTTGGAAAAGATGTCTTCATACTGCAGGTCATGACAGTGAGACTTGGGGCCTTGCTGCACCAGAAGAATTTGAGCCTGTTCCTCGCCTGTGCCGCTATATTTTAGCTGTTTACGAAGATGATCTTAGGCACCCCCTGTGGGCACCTCCCGGTGGCTATGGAATCAACCCTGATTGGTTACTGCTCAAAAAGACATACAAAGATACTCAAGGTCGGGCCCCTCCATATATATTGTATCTTGATCACGATCATGCTGATATAGTTCTTGCCATTAGGGGTCTAAATATGGCAAAGGAAAGTGACTATGCAGTTCTATTGGATAATAGTTTGgggaagagaaaatttgatggAGGATATGTTCACAATGGACTATTGAAGGCTGCTGGATGGGTTTTGGATGCAGAATGTGAATTTTTGAGGGAATTGGTAGAAAAGCACCCTAATTACACTCTGACTTTTGCTGGACATTCCCTTGGGGCAGGAGTAGCAGCAATGTTGACCATGGTTGTGGTACAGAACCGAGATAGAGTTGGAAATATTGAGAGGAGGAGGGTCAGGTGCTATGCTATTGCACCTGCTAGGTGTATATCACTTAATCTGGCTGTCAGATATGCAGACGTTATCAACTCTGTTGTGCTTCAGGATGACTTCTTGCCAAGGACAGCTACACCATTGGAAGATATATTCAAGTCCCTTTTCTGTTTGCCATGCCTGTTGTGCCTGAGGTGCATGAAGGATACATGTATACCAGAGGAGAAGATGTTGAAAGATCCTAGGAGACTCTACGCACCCGGTCGCCTTTATCACATTGTTGAGAGAAAGCCTTTCAGAATGGGAAGGTTTCCACCAGTTGTGAGAACAGCAGTGCCAGTGGATGGAAGGTTTGAGCACATAGTCCTTTCTTGTAATGCCACATCTGATCATGCTATCATTTGGATAGAGAGAGAAGCCCAAAGAGCTCTAGATTTGATGCTGGAGAAAGACCATACCATGGAGATTCCAGCAAAGCAAACAATGGAGCGGCAGCAGACGTTAACTAGGCACAGCGAGGAATACAGAGCAGCATTGCAAAGAGCAAAGACATTAGATGTGCCACATGCTTATACACCACCATCACAATATGGAACTTTTGATGagcaagatgaagaagaatcaTTGCGAAGATCAGAGGCAGGGTCATCTTTCGGTTCAAGTAACAGAAGTAAAACCAACGAAACTTGGGATGAATTGATTGAGCGTTTGTTTGATAAGGATGAGTCAGGTCACATGGTGCTGAAGAAATCACATAGGAATGATTA 1361 0.435 MSIICGLPLVECVYCLACARWAWKRCLHTAGHDSETWGLAAPEEFEPVPRLCRYILAVYEDDLRHPLWAPPGGYGINPDWLLLKKTYKDTQGRAPPYILYLDHDHADIVLAIRGLNMAKESDYAVLLDNSLGKRKFDGGYVHNGLLKAAGWVLDAECEFLRELVEKHPNYTLTFAGHSLGAGVAAMLTMVVVQNRDRVGNIERRRVRCYAIAPARCISLNLAVRYADVINSVVLQDDFLPRTATPLEDIFKSLFCLPCLLCLRCMKDTCIPEEKMLKDPRRLYAPGRLYHIVERKPFRMGRFPPVVRTAVPVDGRFEHIVLSCNATSDHAIIWIEREAQRALDLMLEKDHTMEIPAKQTMERQQTLTRHSEEYRAALQRAKTLDVPHAYTPPSQYGTFDEQDEEESLRRSEAGSSFGSSNRSKTNETWDELIERLFDKDESGHMVLKKSHRND 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01379 453 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 448 - -
Bva03g01379 453 Pfam Lipase 3 N-terminal region 9 74 IPR005592 GO:0016042
Bva03g01379 453 SUPERFAMILY alpha/beta-Hydrolases 43 270 IPR029058 -
Bva03g01379 453 Pfam Lipase (class 3) 109 243 IPR002921 GO:0006629
Bva03g01379 453 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 448 - -
Bva03g01379 453 MobiDBLite consensus disorder prediction 411 425 - -
Bva03g01379 453 CDD Lipase_3 44 241 - -
Bva03g01379 453 Gene3D alpha/beta hydrolase 40 252 IPR029058 -
Bva03g01379 453 MobiDBLite consensus disorder prediction 383 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01379 Bva-Chr3 13210532 13215371 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01379 1 449 Miscellaneous Gene Families AT3G49050 71.882 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01379 - - mtr:MTR_1g100950 832.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01379 03 13210532 13215371 Bva03g01379 03 13210532 13215371 ECH