Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01378 ATGGCGTCCCTTCTGATCACTGTATTTCTGCTTGCGGCGTTTGGGTCCTCTCTCGAGAGCTCTTTTGCGGAAAGCAGCAGGAAAGAATTAAGGAATAAGGAATCCGGTGATAAAATAGCCGTACAACTGCACCACTCAATTTATGGCAACAGAATTGACCCATCACTTGTTGTCCAATTGTCTTGGCGTCCAAGGGTCTTTTTATACAAAGGTTTTTTGTCAGACCAGGAGTGTGACTACCTTATCTATTTGGCACATACTGTGAAAGACAAATCCTCAGGGAATGGTCAACACTCTGAGGGCGTTTCTGCAAAGCAGATGCTTGCATCCGGCTTGCTGCTGAATGTAGAAGATGACATTGTTAAAAggattgaagaaagaatttcaGTTTGGACGTTCCTTCCTAAAGAGAATAGCAAGCCTTTGCAGGTGATGCAATATGGGCCAGAAGAGGCTGGACAAAGCTTACATTACTTTGCTAACAATTCCAAATTGGAATTAAGTGCACCTTTGATGGCAACGGTTGTTTTATACCTCTCAAATGTCACTCAAGGGGGTGAAATTCTCTTCCCTGAGTCAAGGGATAGAAGCTGGTCTAATTGTGGAAAAAGTACTGAGATCCTCAAACCAGTGAAAGGGAATGCAATtctgtttttctctcttcatccCAGCGCTACTCCTGACAAGAGCAGCTCTCATGGCAGATGCCCTGTCCTCAAGGGGAAATTGTGGTCTGCCGTTAAATTCTTCTATGCAAGATCAGTTGGTGGGGAAAAGATCTCACTCACATCAAATTATGATGAATGTACTGACGAAGATGACAGGTGCCTCTCATGGGCATCCATGGGAGAATGCGAACGAAACCCTGTATTCATGATTGGCTCTCCTGATTATTATGGCACATGTAGGAAAAGTTGTAATGCATGCTG 929 0.423 MASLLITVFLLAAFGSSLESSFAESRKELRNKESGDKIAVQLHHSIYGNRIDPSLVVQLSWRPRVFLYKGFLSDQECDYLIYLAHTVKDKSSGNGQHSEGVSAKQMLASGLLLNVEDDIVKRIEERISVWTFLPKENSKPLQVMQYGPEEAGQSLHYFANNSKLELSAPLMATVVLYLSNVTQGGEILFPESRDRSWSNCGKSTEILKPVKGNAILFFSLHPSATPDKSSSHGRCPVLKGKLWSAVKFFYARSVGGEKISLTSNYDECTDEDDRCLSWASMGECERNPVFMIGSPDYYGTCRKSCNAC 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01378 308 ProSiteProfiles ShKT domain profile. 268 308 IPR003582 -
Bva03g01378 308 Gene3D q2cbj1_9rhob like domain 55 250 - -
Bva03g01378 308 SMART ShkT_1 267 308 IPR003582 -
Bva03g01378 308 SMART p4hc 63 250 IPR006620 GO:0005506|GO:0016705|GO:0031418
Bva03g01378 308 PANTHER PROLYL 4-HYDROXYLASE 12-RELATED 3 308 - -
Bva03g01378 308 Pfam 2OG-Fe(II) oxygenase superfamily 142 250 IPR044862 -
Bva03g01378 308 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 3 308 IPR045054 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01378 Bva-Chr3 13205998 13209752 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01378 K00472 - qsu:112019541 402.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01378 03 13205998 13209752 Bva03g01378 03 13205998 13209752 ECH