Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01371 ATGTCTGAAGCAGCCATGGCAGTTGTGAAACCTGAGATGAAATCCTACATCTGGATTCAAACTGCGGATGGTTCTATTCAACAAGTAGAAGAAGAGGTTGCCATGTTTTGCCCAATGATATGCCGGGAAATACTTCAGACAGGCATGGGGTCCTCCAAAAATTATGCCATATCTCTTCCACAACGTGTTAATCCTGCAATCTTGGGTTTGATACTTGATTACTGTCGGTTCCACCAAGTACCGGGTCGCTCTAATAAGGAGCGAAAAACTTATGATGAGAAGTTTATTCGGATGGATACAAAGAAGTTATGTGAGTTGACATCGGCTGCTGACAGCTTGCAATTGAAGCCTTTGGTTGACCTAACCAGTCGATCACTTGCTCGGATTATTGAAGGAAAAACTCCTGAGGAGATACGTGAAACTTTTCATTTGCCTGATGACCTGACAGAGGAAGAGAAGCTCGAACCTCTTAGAAACATAACTGATGATCCTCGTATTCGACTTCTAAACCGGTTATATGCTAGAAAGAGGAAAGAGTTAAAAGAGAGGCAGAAGTTGAAGAATGTTGAGCTTGAGGAGGAACGTGTGGATGAGCGCTCAGTTGATGATCTTCTTTCATTCATTAATGGTACTGATAGAGATATAAAGGGaacaagaacaaataaaaataaaaagaagaataggAGGAAAAAAGACAATGCAAAGGATCCTTCTTCAGAAAATGCAAACAATAACCATAACAAGgagGTGGATTCCTTTCCTCCTGCTTGTCATAACGATGATGTTGACAAGGTCTTGGAGGCCTCTTCCAGTAAATACTCAAGGATGCAAGATCTTCCTGCCTTCAACTTTTCACCCAAGCTTGACTTTGTTGATGGAGATATTGATGATGATTTAGATCCTGTAATGAAGGAGGAACTTGACAgGGAAGTGGAAGATTTTGCACGAAGATTAAATTCAGATTGGCCAGAAAGGATGCAGGAAATTTTATCCTTGGGTCAAGACCGAAGACTTGTACCTATTTCTATGAATGGCAATGGTTCCACACGTCTATATACGAGTTTGGACAGGAGGTA 1076 0.4015 MSEAAMAVVKPEMKSYIWIQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLPQRVNPAILGLILDYCRFHQVPGRSNKERKTYDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRSLARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELKERQKLKNVELEEERVDERSVDDLLSFINGTDRDIKGTRTNKNKKKNRRKKDNAKDPSSENANNNHNKEVDSFPPACHNDDVDKVLEASSSKYSRMQDLPAFNFSPKLDFVDGDIDDDLDPVMKEELDREVEDFARRLNSDWPERMQEILSLGQDRRLVPISMNGNGSTRLYTSLDRR 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01371 358 SUPERFAMILY POZ domain 15 79 IPR011333 -
Bva03g01371 358 Pfam Skp1 family, dimerisation domain 116 153 IPR016072 GO:0006511
Bva03g01371 358 PANTHER OS03G0107000 PROTEIN 1 275 - -
Bva03g01371 358 MobiDBLite consensus disorder prediction 212 260 - -
Bva03g01371 358 Pfam Skp1 family, tetramerisation domain 17 79 IPR016073 GO:0006511
Bva03g01371 358 SUPERFAMILY Skp1 dimerisation domain-like 90 157 IPR036296 GO:0006511
Bva03g01371 358 SMART skp1_3 14 115 IPR001232 GO:0006511
Bva03g01371 358 Gene3D Potassium Channel Kv1.1; Chain A 10 160 IPR011333 -
Bva03g01371 358 PANTHER SKP1 1 275 IPR016897 GO:0006511
Bva03g01371 358 Coils Coil 169 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01371 Bva-Chr3 13162175 13167705 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01371 - - vvi:100247347 572.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01371 03 13162175 13167705 Bva03g01371 03 13162175 13167705 ECH