Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01353 ATGGAGGCTCCTCTGCTTAACAGAGTAGAGGCGGAGACAGCTCCTCCTCCGCTGGTGGCGGAGGACGGTGACTACCTTCCCGCTAGAGGGTACAAGGCATTGAGGACAGTTTTCTTAACAGAAACAATGAAGATGTGGAAGATTGCTGCGCCTATTGCATTCAACACTATCTGCCAATTTGGCATCAACTCAGTCACCACCATCTTCATGGGCCATCTTGGCAATCTTGAGCTCTCTGCTGCCTCACTCTCTATATCTGTTATTGGCATCTTTGTTTTTGGATTCATGCTTGGAATGGGGAGTGCACTGGAGACACTATGTGGTCAAGCTTATGGTGCTGGGCAGGTTCATATGCTTGGTGTTTATATGCAACGTTCatggataattttatttgtgagTTGCATTATCCTCTTGCCTATTTACATCTTTGCGACTCCAATTCTAAAGCTTCTTGGCCAAGAGGATGATATAGCTGATCTTGCTGGAAAATTCACCTATGCAATAATCCCtcaattattttcacttgCCATCAATTTTCCAAGCCAGAAGTTCCTTCAAGCTCAAAGCAAAGTGAACACGATTATGTGGATTGGTTTCGTGGCTCTAATTTTACACATTGTGATGCTTTGGCTCTTCATTTACGTATTTGATTGGGGGATGATTGGTGGGGCAGTGGCATTTGATGTCACAAGTTGGGGAATTGTAGTGGCTCAAGTTATCTATATCATGGGTTGGTGCAAGGAAGGGTGGAAGGGGCTTTCATGGTTGGCATTCAAGGATTTATGGGCATTTGTTAGGCTCTCCCTTGCTTCTGCTGTAATGCTTTGCCTTGAGGTTTGGTATATGATGAGCCTCATAGTTCTTACTGGTCACCTTGATAATGCAGTCATTGCTGTCGATTCCCTCTCTATTTGCATGAATTACAATGGATGGGAATTCATGGTATTTTTAGGGATTAATGCAGCAATCAGTGTCAGAGTTTCCAATGAACTGGGAATGGGGCATCCAAGAGCTGCCAAATACTCTGTCTACGTGACAGTGTTTCAGTCTCTTCTTCTTGGAATATTCTTCatgtttgttattttgatAGCTAGAGACCATTTTGCCATCATCTTCACAAGTAGTAAAACTTTGCAAGAGGCTGTTGCTAACCTAGCATACCTGCTTGCAGCAACTATGGTTCTTAACAGTGTTCAACCAGTAATTTCAGGTGTTGCCATTGGAGGTGGATGGCAGGCACTGGTGGCTTATATAAACGTAGGTTGTTATTACATTGTTGGCCTTCCTCTGGGATATTTGCTTGGTTACAAAGCAAATTTTGGGGTTAAGGGACTTTGGGGTGGTATGATATGTGGAATTGCTCTGCAGACCTTGCTGCTTTTgattgtaatttataaaaccaATTGGAACAAGGAGGTGGAACAAACAACCAAGCGCATGCGAGAATGGGGTGGGCAAAACGTCGTAGTAAATGAAGATGACAAGATAGAGGATACTGCATA 1502 0.4208 MEAPLLNRVEAETAPPPLVAEDGDYLPARGYKALRTVFLTETMKMWKIAAPIAFNTICQFGINSVTTIFMGHLGNLELSAASLSISVIGIFVFGFMLGMGSALETLCGQAYGAGQVHMLGVYMQRSWIILFVSCIILLPIYIFATPILKLLGQEDDIADLAGKFTYAIIPQLFSLAINFPSQKFLQAQSKVNTIMWIGFVALILHIVMLWLFIYVFDWGMIGGAVAFDVTSWGIVVAQVIYIMGWCKEGWKGLSWLAFKDLWAFVRLSLASAVMLCLEVWYMMSLIVLTGHLDNAVIAVDSLSICMNYNGWEFMVFLGINAAISVRVSNELGMGHPRAAKYSVYVTVFQSLLLGIFFMFVILIARDHFAIIFTSSKTLQEAVANLAYLLAATMVLNSVQPVISGVAIGGGWQALVAYINVGCYYIVGLPLGYLLGYKANFGVKGLWGGMICGIALQTLLLLIVIYKTNWNKEVEQTTKRMREWGGQNVVVNEDDKIEDTA 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01353 500 PANTHER PROTEIN DETOXIFICATION 14 480 - -
Bva03g01353 500 CDD MATE_eukaryotic 41 475 IPR045069 GO:0042910|GO:1990961
Bva03g01353 500 PANTHER MULTIDRUG RESISTANCE PROTEIN 14 480 - -
Bva03g01353 500 Pfam MatE 51 210 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva03g01353 500 Pfam MatE 271 433 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva03g01353 500 TIGRFAM matE: MATE efflux family protein 51 446 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01353 Bva-Chr3 13063700 13066589 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01353 K03327 - pvy:116139562 772.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01353 03 13063700 13066589 Bva03g01353 03 13063700 13066589 ECH