Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01352 ATGGAGTCTCCTCTGCTTAACAGCGTAGAAGCTGCGGCAGCTCCTCCACTGGTGGCGGAGGACGGTGACTACCTTCCCGTTAGAGGGTCCAACGCAGTGATGACAGTTTTCTTtacagaaacaaagaaaatgtggAAGATTGCTCTGCCTATTGCTTTCAACACTCTCTGCCAATTTGGCATCAACTCAATCACCACCATCTTCATGGGCCATCTTGGCAATCTTGAGCTCTCTGCTGCCTCAATCGCTGTTTCTGTTGTCGGCACCTTTACTTTTGGATTCATGCTTGGAATGGGGAGTGCACTGGAGACACTATGTGGTCAAGCTTATGGTGCAGGACAGGTTCATATGCTTGGTGTTTACATGCAAAGATCATGGATAATTCTACTTGTGAGCTGCATTATCCTCTTGCCTATTTACATCTTTGCTACTCCAATTCTAAAGCTTCTTGGCCAAGAAGATGATATAGCTGATCTTGCTGGGGTATTTACCATTCTAACAATTCCGCGATTATTCTCACTTGCCATCAATTTTCCAACCCAGAAATTCCTTCAAGCTCAAAGCAAGGTTATGGTGTTAACGTGGATCGGTTTCGTGGCTATACTTATACACACTCTCTTGCTTTGGCTTTTGATTTATGTGTTTGGTTGGGGGATGATTGGTGGAGCAGTGGCATTTGATGTCACTAGTTGGGTGATTGTAGTGGCTCAAGTTATCTATATCATGGGTTGGTGCAAGGAAGGGTGGAAGGGTTTCTCATGGTTGGCATTCAAGGATATATGGGGCTTTGTTAGGCTCTCCCTTGCTTCTGCTGTAATGCTTTGCCTTGAGGTTTGGTATATGACGAGCCTTATCGTTCTTACTGGTCACCTTGATAATGCAATCATTGCTGTTGATTCCCTCTCTATATGCATGAATTACAATTCGTGGGAGTTCATGATATTTATAGGGATTAATGCAGCAATCAGtgTCAGAGTTTCTAATGAACTTGGAATGCGTCATCCAAGAGCTGCCAAATACTCTGTCTATGTGACGGTGTTTCAATCTCTTCTGATTGGAATATTCTTCatgtttgttattttgatAGCTAGAGACCATTTTGCCATCATTTTCACAAGCAATAAGACTTTGGAAGAGGCTGTTGCTAACTTAGCATACCTTCTTGCAGCAACAATGGTTCTAAACAGTGTTCAACCAGTAATTTCAGGTGTTGCCATTGGAGGTGGATGGCAGGCACTAGTGGCTTACATCAATATAGCTTCTTATTACATTTTTGGCCTTCCACTAGGATATTTGCTTGGTTACAAAGCAAATTTGGGGGTTAAGGGACTTTGGGGAGGTATGATATGTGGAATTACTCTGCAGACCTTGCTGCTTTTgattgtaatttataaaaccaATTGGGACAAGGAGGTGGAACAAACAACTAAACGCATGAGAGAATGGACTGGGCAAGACATCAAAGTTGATGAAGATGGTAAGATAGAGGAGAGTGCATA 1499 0.4163 MESPLLNSVEAAAAPPLVAEDGDYLPVRGSNAVMTVFFTETKKMWKIALPIAFNTLCQFGINSITTIFMGHLGNLELSAASIAVSVVGTFTFGFMLGMGSALETLCGQAYGAGQVHMLGVYMQRSWIILLVSCIILLPIYIFATPILKLLGQEDDIADLAGVFTILTIPRLFSLAINFPTQKFLQAQSKVMVLTWIGFVAILIHTLLLWLLIYVFGWGMIGGAVAFDVTSWVIVVAQVIYIMGWCKEGWKGFSWLAFKDIWGFVRLSLASAVMLCLEVWYMTSLIVLTGHLDNAIIAVDSLSICMNYNSWEFMIFIGINAAISVRVSNELGMRHPRAAKYSVYVTVFQSLLIGIFFMFVILIARDHFAIIFTSNKTLEEAVANLAYLLAATMVLNSVQPVISGVAIGGGWQALVAYINIASYYIFGLPLGYLLGYKANLGVKGLWGGMICGITLQTLLLLIVIYKTNWDKEVEQTTKRMREWTGQDIKVDEDGKIEESA 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01352 499 CDD MATE_eukaryotic 40 474 IPR045069 GO:0042910|GO:1990961
Bva03g01352 499 PANTHER MULTIDRUG RESISTANCE PROTEIN 13 479 - -
Bva03g01352 499 TIGRFAM matE: MATE efflux family protein 50 445 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva03g01352 499 Pfam MatE 270 432 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva03g01352 499 Pfam MatE 50 209 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva03g01352 499 PANTHER PROTEIN DETOXIFICATION 13 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01352 Bva-Chr3 13051436 13055084 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01352 K03327 - pvy:116139562 739.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01352 03 13051436 13055084 Bva03g01352 03 13051436 13055084 ECH