Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01329 ATGACGGAGGTGATACTGCATATATATGATGTGACGAATAGTGGATCGGAGAAGACGAACAACACCATTGTTCAGATCAACAAGATCTTCAAGGACGGAATTGGTTTAGGTGGTATATTCCATAGCGCGGTTCAGGTATATGGAGATGATGAATGGTCATTTGGATTTTGTGAGCAAGGTACTGGAGTTTTCAGTTGCCCTTCAGGAAAGAATCCAATGTATACATATCGTGAATCCATGGTTCTAGGGACAACGACCTGTTCTATCTTCAAGATGAATCAAATATTAAGAGAGCTCAGTAGAGAGTGGCCTGGTTGTGCATATGACCTGTTATCCAAAAACTGCAACCACTTTTGTGATGAATTCTGTGAAAGGCTTGGTGTGCCAAAGCTTCCAGGTTGGGTTAATCGGTTTGCCAATGCTGGTGATACTGCTATGGAAGTGGCTGGAAATACAGCATTACGGATGCGGCAAGCCAAAACAGAGATTGTATCAGCAAGCAAAGTAGCATACCGGTTCCTTTTGGGCGTCACAAATAATGTTAGAAATGGTTCAGAGTCTCCAAGCAATTCAAACAGAGGGTCCCCTAGATTTCAAGCTGCTTggataaaaaatcttattactCCTGCTCCAAAACCATCTGCTAGTATAGAAGTTGAAAATCAGGATGAGGTCAAGCTTCAAAAACAACAGCAAGAAGATCCCAAGACACCGCTACGACAGAGTTCAAGTTCACTTGATAGTTG 746 0.4169 MTEVILHIYDVTNSGSEKTNNTIVQINKIFKDGIGLGGIFHSAVQVYGDDEWSFGFCEQGTGVFSCPSGKNPMYTYRESMVLGTTTCSIFKMNQILRELSREWPGCAYDLLSKNCNHFCDEFCERLGVPKLPGWVNRFANAGDTAMEVAGNTALRMRQAKTEIVSASKVAYRFLLGVTNNVRNGSESPSNSNRGSPRFQAAWIKNLITPAPKPSASIEVENQDEVKLQKQQQEDPKTPLRQSSSSLDS 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01329 248 Gene3D PPPDE domains 1 170 IPR042266 -
Bva03g01329 248 PANTHER DESUMOYLATING ISOPEPTIDASE 1 231 IPR008580 GO:0008233
Bva03g01329 248 Pfam PPPDE putative peptidase domain 3 146 IPR008580 GO:0008233
Bva03g01329 248 MobiDBLite consensus disorder prediction 212 248 - -
Bva03g01329 248 MobiDBLite consensus disorder prediction 234 248 - -
Bva03g01329 248 ProSiteProfiles PPPDE domain profile. 2 148 IPR008580 GO:0008233
Bva03g01329 248 PANTHER PPPDE PUTATIVE THIOL PEPTIDASE FAMILY PROTEIN-RELATED 1 231 - -
Bva03g01329 248 SMART DUF862_2a 2 157 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01329 Bva-Chr3 12874104 12877841 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01329 - - cpap:110810316 412.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01329 03 12874104 12877841 Bva03g01329 03 12874104 12877841 ECH