Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01321 ATGGCGGATGTTCAGATGGCCGACGCTGAGACTTTCGCCTTCCAGGCTGAAATCAACCAGCTTCTCAGTTTGATCATCAACACTTTCTACAGCAACAAGGAGATATTCCTTCGTGAACTCATCAGCAATGCTTCCGATGCATTGGATAAAATCCGATTTGAGAGCCTGACCGACAAGAGTAAGCTCGATGCTCAACCAGAGCTCTTCATTAGACTCGTGCCTGACAAGGCAAACAAGACTCTGTCCATTATCGAGAGTGGTATTGGTATGACCAAAGCAGATTTGGTAAACAACTTGGGGACCATTGCAAGGTCCGGAACCAAGGAATTTATGGAGGCCTTACAGGCTGGAGCTGATGTCAGCATGATTGGTCAATTCGGTGTTGGTTTCTACTCTGCTTACCTAGTTGCCGAGAAGGTCATTGTGACCACAAAGCACAATGACGACGAGCAATACATCTGGGAATCTCAGGCAGGTGGTTCCTTCACCATTACTAGGGATGTCAGTGGCGAGCAACTCGGAAGAGGAACAAAGATAACCCTCTTCCTTAAAGAGGATCAgTTGGAATACTTAGAGGAGAGGAGAATTAAGGACCTCGTGAAGAAACACTCTGAGTTCATTAGCTATCCCATCTACCTCTGGACTGAGAAAACAACTGAGAAGGAGATcagtgatgatgaagatgatgagcCCAAGAAGGAGCGAGAAGGAGATATTGAGGAAGTTGATGAACAGAAAGAGGCCAAATCAAAGAAGAAGATTAAGGAAGTTTCTCACGAGTGGCAACTCATCAACAAGCAAAAACCAATCTGGTTGCGCAAGCCAGAGGAGATTACTAAGGAAGAATACGCTTCCTTTTACAAGAGCTTGACCAATGACTGGGAAGACCACTTGGCTGTTAAGCACTTCTCTGTTGAGGGTCAGCTTGAATTCAAGGCCATTCTCTTTGTTCCCAAAAGGGCTCCTTTTGATCTCTTTGACACTcggaagaaattaaacaacatCAAGCTCTATGTCAGGAGGGTATTCATTATGGACAACTGCGAGGAACTCATTCCTGAATACCTTAGTTTTGTCAAAGGTGTCGTTGACTCCGAGGACTTGCCCCTCAACATCTCTCGTGAGACGTTACAACAGAACAAGATCCTGAAGGTGATCAGGAAGAACCTCGTAAAGAAATGCATCGAGATGTTCAACGAGATTGCGGAAAACAAGGAAGACTACAACAAATTCTACGATGCTTTCTCGAAGAACTTGAAATTGGGCATCCACGAGGACAGCCAAAACAGAGCCAAATTGGCTGATCTGCTTCGATACTACTCCACAAAGAGTGGAGATGAGTTGACGAGCTTAAAGGACTACGTCACCCGGATGAAAGAAGGTCAGAAGGATATTTACTACATCACCGGAGAGAGCAAGAAAGCAGTAGAGAACTCGCCATTCTTGGAAAGACTCAAGAAGAAGGGCTACGAGGTTTTGTTCATGGTCGACGCCATTGACGAGTACGCGGTCGGACAACTCAAAGAGTATGATGGCAAGAAGCTGGTCTCTGCCACGAAGGAAGGTCTGAAACTGGATGACGACAGtgaagaggagaaaaagaagaaagatgaaaagaagaagTCTTTCGAGGACCTCTGCAAGATCATCAAGGACATCCTGGGAGACAAGGTTGAAAAGGTTGTTGTCTCCGACAGGATTGTCGATTCCCCGTGCTGTTTGGTCACTGGTGAGTACGGATGGACCGCCAACATGGAGAGAATCATGAAAGCTCAGGCTCTGAGAGACAACAGCATGAGCGGCTACATGTCGAGCAAGAAGACCATGGAAATCAACCCTGATAACGGTATCATGGAGGAGCTGAGAAAGAGAGCTGAAGCTGACAAGAACGATAAGTCAGTGAAGGATCTTGTATTGCTTCTCTTCGAGACAGCTCTGTTGACTTCTGGTTTCAGCCTCGACGACCCCAACACTTTCGCAGCTAGGATTCACAGGATGTTGAAGCTGGGTCTCAGCATTGATGAGGAGGACACTGGTGCTGACGATGCTGATATGCCACCATTGGAAGAGGACGGTGGTGAGGAGAGCAAGATGGAGGAAGTCGACTA 2108 0.4507 MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNASDALDKIRFESLTDKSKLDAQPELFIRLVPDKANKTLSIIESGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAEKVIVTTKHNDDEQYIWESQAGGSFTITRDVSGEQLGRGTKITLFLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISDDEDDEPKKEREGDIEEVDEQKEAKSKKKIKEVSHEWQLINKQKPIWLRKPEEITKEEYASFYKSLTNDWEDHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKLNNIKLYVRRVFIMDNCEELIPEYLSFVKGVVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIEMFNEIAENKEDYNKFYDAFSKNLKLGIHEDSQNRAKLADLLRYYSTKSGDELTSLKDYVTRMKEGQKDIYYITGESKKAVENSPFLERLKKKGYEVLFMVDAIDEYAVGQLKEYDGKKLVSATKEGLKLDDDSEEEKKKKDEKKKSFEDLCKIIKDILGDKVEKVVVSDRIVDSPCCLVTGEYGWTANMERIMKAQALRDNSMSGYMSSKKTMEINPDNGIMEELRKRAEADKNDKSVKDLVLLLFETALLTSGFSLDDPNTFAARIHRMLKLGLSIDEEDTGADDADMPPLEEDGGEESKMEEVD 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01321 702 Pfam Hsp90 protein 189 691 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Bva03g01321 702 PANTHER HEAT SHOCK PROTEIN 90-1 1 701 - -
Bva03g01321 702 SUPERFAMILY HSP90 C-terminal domain 545 667 IPR037196 -
Bva03g01321 702 CDD HATPase_Hsp90-like 19 207 - -
Bva03g01321 702 Gene3D - 265 433 - -
Bva03g01321 702 Hamap Chaperone protein HtpG [htpG]. 7 668 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Bva03g01321 702 Gene3D - 521 672 IPR037196 -
Bva03g01321 702 SUPERFAMILY Ribosomal protein S5 domain 2-like 266 521 IPR020568 -
Bva03g01321 702 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 186 IPR003594 -
Bva03g01321 702 PRINTS 90kDa heat shock protein signature 98 115 IPR020575 -
Bva03g01321 702 PRINTS 90kDa heat shock protein signature 193 211 IPR020575 -
Bva03g01321 702 PRINTS 90kDa heat shock protein signature 175 192 IPR020575 -
Bva03g01321 702 PRINTS 90kDa heat shock protein signature 10 30 IPR020575 -
Bva03g01321 702 PRINTS 90kDa heat shock protein signature 80 97 IPR020575 -
Bva03g01321 702 PRINTS 90kDa heat shock protein signature 123 145 IPR020575 -
Bva03g01321 702 PRINTS 90kDa heat shock protein signature 31 53 IPR020575 -
Bva03g01321 702 Gene3D - 434 520 - -
Bva03g01321 702 SMART HKATPase_4 32 187 IPR003594 -
Bva03g01321 702 MobiDBLite consensus disorder prediction 676 702 - -
Bva03g01321 702 PANTHER HEAT SHOCK PROTEIN 90 FAMILY MEMBER 1 701 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Bva03g01321 702 MobiDBLite consensus disorder prediction 220 247 - -
Bva03g01321 702 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 10 218 IPR036890 -
Bva03g01321 702 Gene3D - 7 233 IPR036890 -
Bva03g01321 702 ProSitePatterns Heat shock hsp90 proteins family signature. 30 39 IPR019805 GO:0005524|GO:0006457|GO:0051082
Bva03g01321 702 MobiDBLite consensus disorder prediction 674 702 - -
Bva03g01321 702 PIRSF HSP90_HTPG 1 702 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01321 Bva-Chr3 12832111 12835154 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01321 K04079 - cpap:110810309 1254.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01321 03 12832111 12835154 Bva04g01184 04 8082282 8085327 ECH
Bva03g01321 03 12832111 12835154 Bva03g01321 03 12832111 12835154 ECH