Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01316 ATGATTGATCAGCAATTAACGGCAATAGGAAACATTGAGGCATCCCAAGTGGTGAAAAAGCTCCAGAAGATATGTGACCCTAAAATACACTCTGCTGCTGAATTAGCAGCCAAAGAGGGGCAGGAGGATGAAGCTCCTAGGAGAGATGACGACAAAACAAAAAAGGTAGTGTTAAAGGTGGAATTAcctaataaagaaaagaaggaaaaggccATGAAGGCAGTGGCTGAATTGGATGGGCTCACTTCAATGACTGTGGACAAAAACCGCAAGAAATTAACGGTGATTGGAGACATTGACGCATCCAAGGTGGAGGAGAAGCTCAAGAAGATATGTGGCGCTATAATAATGAGTGTTGCTCCTCTTGGACCagcaaaagagaagagaagtgaTGTCAAAGATGATTTGGCTGCTTTCGCCAGTGCCAGTACTACAATTTTTGGTAAGGTAGTGTTGAATGTGAAATTATCTGAtaacaagaagaagataaaggcTATGAAGGCAATCGCTGAACTTGATGGGGTTTATACATTGAGTGTGGACATGATCGACAAGCAATTAACGGCAATAGGAGACATTGAGGCAGCCCAAGTGGTGAAAAAGCTCAAGAAGATATGTGACCCTGAAATAATACACTTTGTTGATTCACAAGCCAGAGAGGAGGATGAAACTCCTAAGAGAGATGACAACAAAACACATAAGGTAGTGTTAAAGGTGGAATTActtgataaagaaaagaaggaaaaggccATGAAGGCAGTGGCTGAATTTGATGGGCTTGCTTCAATGACTGTGGACAAAAACCGCAGGAAATTAACAGTGATTGGAGACATTAACGCGTTCAAGGTGGAGAAGAAGCTCGAGAAGATATGTGGCGCTAAAATAGTGAGTGTCGCTCCTCTCGGACCAgccaaagagaagagaagtgaTGTCAAAGATGATTTGGCTGCTCTCGCCAGGGCCAGTACTACTTTTTTTGGCGTGGGCAAGAACATGCTATTGAGGGTTATGTCATTAACTCAAGGTAGTGGTAAAGGTGGAATTATAGATgacaaacagaagaaaaaggcCATGAAGGCAGTCACTGAACTTGATGGGCTTTATTCATTGGCTGTGGACAGGATCGACAAGGAATTAACAGCGATTGGAGAAATCGAAGCAGCCGATGTGGTGAAAAAGCTCAAGAATATATGTAGCCCTAAATTACACATGTTTGAATCACTAGCCAAAGAGGAGAAGATGAAGGATGAAGCTCCTAAGaaatataacaacaaaaatacaCATAAGGTAGAGTTTGATGTGGAGTTACCTGATTACAAACTCAAGAAAACGGCCATGAAGGAAGTTGCTGAATTTGATGGTCTTGATTTGGTGACTGTGGACACAAAGGGCCGGAAGTTAACGGCAATTGGAGACATTGATGCActcaaaattgagaaaaagcTCAAGAAGATATGTGCTAGCGCTAAAATACTCAGCGTTGCTCCTGTTGGATCAGCcaatgagaagaagaaaaatgatgagaaaaagaaagaagatgagAAGATCAAGAAAGTGATGCCAAAGAAGGTAGTGTTAAAGGTGGAACTGTTCGATGACAAAATCAAGAAGAAGGCCATGAAGGCAGTCTCTGGCCTTTCAGGAGTTGAGTCAGTGTCTGTGGACATGAAGGACAGGAAATTGACCTTAATCGGAGACACCGACCCCATTAAAGTGGTTAGCAAGCTCAAGAAGCTGTGTCACGCTGAAATACTCACAGTTGGACCAGCCAAAgaggagaagaaggaagaaactcCTAAGAAAGATGACAAGAAAGATGAATTGGCTGCTCTTCTCAAGAGCTGGGAAGAGTATTACAGACAGATGAGACCACAGTATTACTATGTTGGAACTGTGCAAGAGGATCACAATTGCAGCTGCATCATCTGCTA 1931 0.3791 MIDQQLTAIGNIEASQVVKKLQKICDPKIHSAAELAAKEGQEDEAPRRDDDKTKKVVLKVELPNKEKKEKAMKAVAELDGLTSMTVDKNRKKLTVIGDIDASKVEEKLKKICGAIIMSVAPLGPAKEKRSDVKDDLAAFASASTTIFGKVVLNVKLSDNKKKIKAMKAIAELDGVYTLSVDMIDKQLTAIGDIEAAQVVKKLKKICDPEIIHFVDSQAREEDETPKRDDNKTHKVVLKVELLDKEKKEKAMKAVAEFDGLASMTVDKNRRKLTVIGDINAFKVEKKLEKICGAKIVSVAPLGPAKEKRSDVKDDLAALARASTTFFGVGKNMLLRVMSLTQGSGKGGIIDDKQKKKAMKAVTELDGLYSLAVDRIDKELTAIGEIEAADVVKKLKNICSPKLHMFESLAKEEKMKDEAPKKYNNKNTHKVEFDVELPDYKLKKTAMKEVAEFDGLDLVTVDTKGRKLTAIGDIDALKIEKKLKKICASAKILSVAPVGSANEKKKNDEKKKEDEKIKKVMPKKVVLKVELFDDKIKKKAMKAVSGLSGVESVSVDMKDRKLTLIGDTDPIKVVSKLKKLCHAEILTVGPAKEEKKEETPKKDDKKDELAALLKSWEEYYRQMRPQYYYVGTVQEDHNCSCIIC 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01316 643 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 522 643 - -
Bva03g01316 643 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 233 312 - -
Bva03g01316 643 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 148 231 - -
Bva03g01316 643 SUPERFAMILY HMA, heavy metal-associated domain 520 579 IPR036163 GO:0046872
Bva03g01316 643 Gene3D - 228 303 - -
Bva03g01316 643 Gene3D - 334 412 - -
Bva03g01316 643 Gene3D - 423 499 - -
Bva03g01316 643 Gene3D - 49 124 - -
Bva03g01316 643 Gene3D - 517 593 - -
Bva03g01316 643 PANTHER ION-BINDING PROTEIN, PUTATIVE-RELATED 522 643 - -
Bva03g01316 643 PANTHER ION-BINDING PROTEIN, PUTATIVE-RELATED 233 312 - -
Bva03g01316 643 PANTHER ION-BINDING PROTEIN, PUTATIVE-RELATED 148 231 - -
Bva03g01316 643 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 54 133 - -
Bva03g01316 643 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 428 516 - -
Bva03g01316 643 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 1 53 - -
Bva03g01316 643 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 349 424 - -
Bva03g01316 643 PANTHER ION-BINDING PROTEIN, PUTATIVE-RELATED 349 424 - -
Bva03g01316 643 Gene3D - 148 215 - -
Bva03g01316 643 Pfam Heavy-metal-associated domain 527 578 IPR006121 GO:0046872
Bva03g01316 643 PANTHER ION-BINDING PROTEIN, PUTATIVE-RELATED 54 133 - -
Bva03g01316 643 PANTHER ION-BINDING PROTEIN, PUTATIVE-RELATED 428 516 - -
Bva03g01316 643 PANTHER ION-BINDING PROTEIN, PUTATIVE-RELATED 1 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01316 Bva-Chr3 12784344 12798633 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01316 - - pvy:116127976 127.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01316 03 12784344 12798633 Bva03g01316 03 12784344 12798633 ECH