Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01309 ATGAAAGAGCATGAGGTCCAATGTTGTGGACTCAGTTTCTGGGTATATCTAGTCATTGGTCTGGGGCTTGTAGCATTTGCAGGTATCTCCTCAGGCCTTGCTCTTGGACTGTTGTCCTTCAGCCAGGTTGATCTTGAGGTCTTCGTTAAGGCCGGTCGCCCAAACGATAAGAAGAATGCAGAGAGGATTCTACCTATTGTAAAGAATGgtcattttgttttgtgtaCCCTCCTGATAGGAAAATCACTAGCCATAGAGGCTTTGCCAATCATTATGGATACAATACTCCCTGTTTGGGTTGCCATTCTTTTGTCAGCTCCCCTGGTGATTGTATTTGCAGAGatTGTTCCTCAAGCTGTCTGCTCTAGACATGGACTAACTCTGGGGGCAAAAATGGCTCCCTTTGTTCAACTGCTTCATCTGATCTTCTTCCCTATATCCTACCCAGCTAGTAAGCTGTTGGATTGGATCCTAGGAAAAAGCCATTCTGTTCTCTTGAGAAGATCAGAACTGAAGACATTTGTGGACTTGCATGCAAACGAGGCAGGGAAAGGTGGTGAATTATCTCGTCATGAAACTTCCATTATCACAGGTGCCATGGATATGACTCAGAAGACAGCCAAAGATGCAATGACACCCATATCTCAAACCTTTTCCCTTGACATAAACTCCAAACTCGACATGCATACAATGACATTAATAATGAACAAAGGTCACAGTAGAATACCTATTTACTCTGGAAGCCCGAGAAATATAATTGGCCTCATACTTGTTAAGAATTTGATGTTCTGTAGCCCGGAAGACCAGACTCCAATCAAGAATTTGATCATAAGAAGAATTCCTAGGGTTTGCGACAATTGGCCACTATATGAGATATTGAAGCTATTCCAGAAGGGCCACAGTCATATGGCTGTTGTCTTGAAGAATAACAAGAACACTGAGAACACTTCAGCTCGTGCTGTGGGTGAACCTAccattttgaatataattactgataaaaaattaaacctggTGCATGATATTGGAGGATCTAACTCTTCCTTGGGTCTGCAAAAGAATCGGAGTATTTCCATTAATGAATCTACTTTATCTTCAACTGAAGAGGAGTTTCACAGTGCAACACTGCAGAATGTCATGGCTCTTGAAAATGAACTGCATGAAGCGTCGAGACAATCGGAGAGAGAAAACAGATATATTTCACAAGAAGAAATGGAATCTCTTCCTGCTGCCTTTGATGAGGGTGCCATTGGTATCATAACAATGGAGGATGTTATGGAACAACTCTTACAGGAAGACATATTGGATGAAACTGATGAATATATTCATGTCCAAAAGAAGTG 1340 0.4045 MKEHEVQCCGLSFWVYLVIGLGLVAFAGISSGLALGLLSFSQVDLEVFVKAGRPNDKKNAERILPIVKNGHFVLCTLLIGKSLAIEALPIIMDTILPVWVAILLSAPLVIVFAEIVPQAVCSRHGLTLGAKMAPFVQLLHLIFFPISYPASKLLDWILGKSHSVLLRRSELKTFVDLHANEAGKGGELSRHETSIITGAMDMTQKTAKDAMTPISQTFSLDINSKLDMHTMTLIMNKGHSRIPIYSGSPRNIIGLILVKNLMFCSPEDQTPIKNLIIRRIPRVCDNWPLYEILKLFQKGHSHMAVVLKNNKNTENTSARAVGEPTILNIITDKKLNLVHDIGGSNSSLGLQKNRSISINESTLSSTEEEFHSATLQNVMALENELHEASRQSERENRYISQEEMESLPAAFDEGAIGIITMEDVMEQLLQEDILDETDEYIHVQKK 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01309 446 PANTHER CBS DOMAIN PROTEIN 1 446 - -
Bva03g01309 446 CDD CBS_pair_CorC_HlyC_assoc 206 307 IPR044751 -
Bva03g01309 446 Gene3D - 351 436 IPR046342 -
Bva03g01309 446 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 1 446 IPR045095 GO:0010960
Bva03g01309 446 SUPERFAMILY CBS-domain pair 195 311 IPR046342 -
Bva03g01309 446 Coils Coil 371 398 - -
Bva03g01309 446 Gene3D - 192 332 IPR046342 -
Bva03g01309 446 ProSiteProfiles CNNM transmembrane domain profile. 9 192 IPR002550 -
Bva03g01309 446 Pfam Cyclin M transmembrane N-terminal domain 21 187 IPR002550 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01309 Bva-Chr3 12735009 12738162 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01309 K16302 - gmx:100791387 649.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01309 03 12735009 12738162 Bva03g01309 03 12735009 12738162 ECH