Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01300 ATGATGTACGTGTTCGATAGGAATGGTGTCTGCTTGCTCTACAGAGAATGGAATCGCCCTCTTCGAACACTGAATGCTCAGCAAGACCACAAATTAATGTTCGGTCTTCTTTTCTCACTTAAGTCCTTAACTGCCAAGATGGATCCTACTAGTGCAGAGAAAGGAAACCTTGGGGTGCCTCAGTTACTTGGTCATGGTTGTTCCTTTCACAGTTTTCGTACTAACACATACAAGCTCAGTTTCATGGAAACTCCTTCTGGGATAAAGATTATCTTGGTCACTCATCCCAGGACTGGTGATCTACGGGAATCTCTAAAGTACATCTACAACTTGTATTTTGAATATGTTGTCAAGAATCCACTCTATAATCCAGGATCTCCAATTAGGTCCGAGCTGTTCAATACAACGCTGGACCAGTATGTGAGAGGCATCGCATA 437 0.4279 MMYVFDRNGVCLLYREWNRPLRTLNAQQDHKLMFGLLFSLKSLTAKMDPTSAEKGNLGVPQLLGHGCSFHSFRTNTYKLSFMETPSGIKIILVTHPRTGDLRESLKYIYNLYFEYVVKNPLYNPGSPIRSELFNTTLDQYVRGIA 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01300 145 CDD TRAPPC1_MUM2 2 140 - -
Bva03g01300 145 PANTHER TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 1-LIKE 1 144 - -
Bva03g01300 145 Gene3D - 1 145 - -
Bva03g01300 145 PANTHER TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 1 144 IPR007233 GO:0016192|GO:0030008
Bva03g01300 145 SMART Sybindin_2 1 144 IPR007233 GO:0016192|GO:0030008
Bva03g01300 145 SUPERFAMILY SNARE-like 2 143 IPR011012 -
Bva03g01300 145 Pfam Sybindin-like family 2 142 IPR007233 GO:0016192|GO:0030008
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01300 Bva-Chr3 12668106 12672523 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01300 K20300 - csin:114295032 278.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01300 03 12668106 12672523 Bva03g01300 03 12668106 12672523 ECH