Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01299 ATGGAAGAAGCTATAATTCTGTACTCAGCTCCTCTCCCTGGCCACCTGCTGCCCATGGTGGAGCTAGGCAAGCTCATACTCTCTCACCATCCATCTCTAACCATACAGATTCTCAGCACCACCGCACCCGACGGCACAGATCTCATTTCATCCTATCTGGCCACCGTCTCCGCCACCATTCCCTCCATCACTTTCCACAATCTCCCCACCGTTACCCTTCCTCCCTCCTTCTTCTCCACCAAAGGCAACCAAAAAAACCCCCTCTTCGAAGTTCTTCGCCTCAACAACCCAAATGTCCACCAAACTCTCCTATCCATCTCCCAAAGCTACACCATCCATGGCTTCGTCATCGACTTCTTCTGCTTTCACTCTGTATCAGTGGCCTCCAAGCTCAACATCCCCGTCTACTACTTTATCCCCTGCGGTGGAAGCAACCTTGCTTCGTTCCTTTATATGAGCACCATCCATCGCACTATGAACAAGAGCTTCAAAGATCTCGACACCCATATTCACATTCCCGGATTGCCACCGACACATAGCAGGGACATGCCCCAATCACTGCTAGACCGCGACAGTCAAGTCTATAAGAGCTTGATCGAATCCTCTGCTCTTGCAACCAAAGCAGCTGGAATTATTGTCAACACATTTGAAACTCTTGAAGCCAGACCTCTCAAGGCGGTATCTGATGGTTTATCTGTACCCAATGGTTCAACACCGCCGGTTTATTGCTTGGGTCCTTTAATTGCGGACAATCATCAAACAGGTGGTGAGTATGATTGTTTGAAGTGGCTGGACTCCCAACCCAGCAAGAGTGTTGTGTTTCTGTGTTTTGGAAGTATGGGTCTGTTTTCCACAGTGCAATTAAAGCAAATAGCTGATGGGTTGGAGAGAAGTGGGCAGAGATTCTTGTGGGTAGTGCGCAACCCACCATCGGAGAAAAGCCATAAATTGGCTCCGTGGGCAGAAGAGGACCCTGATCTGGATTCTTTACTGCCTGAGGGGTTCCAGGATCGGACCAGAGAGAGGGGCCTGGTGGTGAAGAAGTGGGTTCCACAGTTGGCTGTGTTGAAGCATGACTCGGTGGGTGGGTTCGTGACTCACTGTGGATGGAACTCGGTGCTTGAAGCGGTCTGCTCTGGTGTGCCGATGATTGCTTGGCCACTGTATGCGGAGCAGAGATCGAATAGGGTGTTCATGGTGGAGGAGATGAAGATTGCGCTGTGGATGCATGAATCTGAGTCCGGGTTAGTCACAGCGAGTGAGATTGAGGAGCGAGTTATAGAGCTGATTGAATCGGAGAAAGGTGAGTTGGTGAGGAACCGAGTCATGGTAGCAAAACGTGAAGGTAAGGCTGCATTGCTCCAAGGTGGGTCTTCCCGTCTAGCGTTGACCAAATTTGTTCAGTCCTGGAAGAGAGAGTG 1421 0.5039 MEEAIILYSAPLPGHLLPMVELGKLILSHHPSLTIQILSTTAPDGTDLISSYLATVSATIPSITFHNLPTVTLPPSFFSTKGNQKNPLFEVLRLNNPNVHQTLLSISQSYTIHGFVIDFFCFHSVSVASKLNIPVYYFIPCGGSNLASFLYMSTIHRTMNKSFKDLDTHIHIPGLPPTHSRDMPQSLLDRDSQVYKSLIESSALATKAAGIIVNTFETLEARPLKAVSDGLSVPNGSTPPVYCLGPLIADNHQTGGEYDCLKWLDSQPSKSVVFLCFGSMGLFSTVQLKQIADGLERSGQRFLWVVRNPPSEKSHKLAPWAEEDPDLDSLLPEGFQDRTRERGLVVKKWVPQLAVLKHDSVGGFVTHCGWNSVLEAVCSGVPMIAWPLYAEQRSNRVFMVEEMKIALWMHESESGLVTASEIEERVIELIESEKGELVRNRVMVAKREGKAALLQGGSSRLALTKFVQSWKRE 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01299 473 CDD GT1_Gtf-like 5 454 IPR002213 GO:0008194
Bva03g01299 473 Gene3D Glycogen Phosphorylase B; 254 454 - -
Bva03g01299 473 Gene3D Glycogen Phosphorylase B; 5 459 - -
Bva03g01299 473 ProSitePatterns UDP-glycosyltransferases signature. 349 392 IPR035595 -
Bva03g01299 473 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 472 - -
Bva03g01299 473 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 264 402 IPR002213 GO:0008194
Bva03g01299 473 PANTHER UDP-GLYCOSYLTRANSFERASE 88A1-LIKE 2 472 - -
Bva03g01299 473 PANTHER GLYCOSYLTRANSFERASE 2 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01299 Bva-Chr3 12665892 12667439 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01299 2 470 Glycosyltransferase AT3G16520 49.684 5.23e-155 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01299 - - gmx:100777870 593.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01299 03 12665892 12667439 Bva03g01299 03 12665892 12667439 ECH