Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00760 ATGCGTCGACGACCATCTCCAACCTTCAAATCCGTTCTCTTTctcctcattttctctctctatcctCTTTCTCTCACTGCCCGCACCTTTGTCCTCGTCCTCTCTCAGGACAACCCCAAGGAGGGCCCCGCATCCGCCGATCCAAGTCAGTCTGATTCGACCGCTGAGTGGGATGAGTTTGGTGACTCGGATTCCAACAAGTCCGAAGAGGAGCTTGACCCGGGATCATGGATCCCCATCTTCGAGTCCGACTCAGCAGCCCCTGCCGTCGAATTGAGAACGGAGTCCGCAGGGCTTTACTACTCCGGTGTGGAAAAAATGATGTCCGCGGTTAGCTCAGGCGATGTGAGTTTAATGGAGGAGGCGACAGGGGAGATCGAGACGGCAGCTGAACCGGGGTACCCAGCAGCGCAGTCAGTGCTAGGGTTTCTGTATGGAATAGGCCAtgtgaaagagaagaataaagCAAAGGCATTTTTGTATCATCACTTTGCTGCTGAGGGCGGTAATATGCAGTCCAAGATGGCTTTGGCTTATAAATACTTTCGCCAAGATATGGATGAAAAGGCTGTTAAGCTTTATTCTAAATTAGCAGAAGTAGCAGTAAACAGTTTCTTAATTTCAAAAGATTCCCCTGTTATTGAACCAGTTAGGCTCCACAATGGAGCTGAGGAGAATAAAGAGGCTCTGAGAAAATCTAGAGGGGAGGAAGATGAGGACTTTCAGATATTGGAATATCAAGCACAGAAAGGTAATGCTGGAGCGATGTACAAAATTGGGCTGTTTTACTACTTTGGCCTACGTGGATTAAGGCGTGATCATGCCAAGGCATTGTCCTGGTTCTTGAAGGCAGTGGATAAGGGAGAGCCAAGGTCAATGGAACTTCTTGGAGAGATTTATGCTGGGGGAGCAGGTGTTGAGAGAAACTATACTAAAGCTCTGGAATGGCTTACACTTGCATCAAAGCAGCAACTATATTCTGCTTACAATGGGATGGGTTATTTGTATGTAAAAGGCTATGGAGTGGACAAGAAGAATTACACAAAAgcaaaagaatattttgaaaaggCTGCTAATAACGATGAGGTTGGTGGGCATTATAACCTGGGTGTCATGTATCTCAAAGGGATTGGGGTAAAAAGAGATGTGAAGTTGGCATGTAAGTACTTCATAGTTGCTGCTAATAATGGTCAACCAAAAGCATTCTACCAGCTTGCTAAGATGTTCCATACTGGTGTTGGACTCAAGAAGAATATTCAGATGGCTACTGCATTGTACAAGCTTGTGGCAGAGCGGGGTCCTTGGAGTTCCTTGTCTAGATGGGCACTAGAATCATACTTAAAAGGTGATATTGGTAAGGCATTTTTGCTGTATTCAAGAATGGCAGAGATGGGCTATGAGGTGGCCCAAAGTAATGCCGCATGGATTCTCGACAAATATGGAGAACGTAGCATGTGCATGGGTGAATCTGGATTTTGCACAGATGCCGAAATGCATGAGCGTGCACATTCTCTGTGGTGGCAAGCTTCTGAGCAGGGTAATGAACACGCAGCTTTACTGATTGGAGATGCTTATTACTATGGCCGGGGCACTGCCAGGGATTATGAACGAGCTGCTGAGGCTTACATGCATGCTAAATCTCAATCTAATGCACAAGCCATGTTCAATCTTGGATACATGCACGAACATGGCCAAGGACTTCCATTTGACCTTCACCTGGCCAAGCGTTACTATGATGAAGCTCTGGAGCATGACCCTGCAGCAAAGTTACCTGTCACTCTGGCGCTTACAAGTTTGTGGATGCGTAAGAATTATGCTGATAGTTTCATGGTCAAGATGATTGATTCGTTGCCTGAAGTCTATCCCAAAGTAGAAGCATGGGTGGAGAATGTGCTTTTGGAGGAGGGGAATGCAACAATTCTTACTCTCTTTGCATGTCTTCTAACTGTGCTATATCTTCGTGAGAGGCAACGTAGGCACGCTGCTGTTGTAGCTGGAGATGGGGAGGTGGCTGAGCCACATAACCCTAATGAGCGTTG 2039 0.4522 MRRRPSPTFKSVLFLLIFSLYPLSLTARTFVLVLSQDNPKEGPASADPSQSDSTAEWDEFGDSDSNKSEEELDPGSWIPIFESDSAAPAVELRTESAGLYYSGVEKMMSAVSSGDVSLMEEATGEIETAAEPGYPAAQSVLGFLYGIGHVKEKNKAKAFLYHHFAAEGGNMQSKMALAYKYFRQDMDEKAVKLYSKLAEVAVNSFLISKDSPVIEPVRLHNGAEENKEALRKSRGEEDEDFQILEYQAQKGNAGAMYKIGLFYYFGLRGLRRDHAKALSWFLKAVDKGEPRSMELLGEIYAGGAGVERNYTKALEWLTLASKQQLYSAYNGMGYLYVKGYGVDKKNYTKAKEYFEKAANNDEVGGHYNLGVMYLKGIGVKRDVKLACKYFIVAANNGQPKAFYQLAKMFHTGVGLKKNIQMATALYKLVAERGPWSSLSRWALESYLKGDIGKAFLLYSRMAEMGYEVAQSNAAWILDKYGERSMCMGESGFCTDAEMHERAHSLWWQASEQGNEHAALLIGDAYYYGRGTARDYERAAEAYMHAKSQSNAQAMFNLGYMHEHGQGLPFDLHLAKRYYDEALEHDPAAKLPVTLALTSLWMRKNYADSFMVKMIDSLPEVYPKVEAWVENVLLEEGNATILTLFACLLTVLYLRERQRRHAAVVAGDGEVAEPHNPNER 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00760 679 MobiDBLite consensus disorder prediction 39 74 - -
Bva03g00760 679 SUPERFAMILY HCP-like 234 345 - -
Bva03g00760 679 Pfam Sel1 repeat 448 466 IPR006597 -
Bva03g00760 679 Pfam Sel1 repeat 403 433 IPR006597 -
Bva03g00760 679 Pfam Sel1 repeat 327 361 IPR006597 -
Bva03g00760 679 Pfam Sel1 repeat 366 397 IPR006597 -
Bva03g00760 679 Pfam Sel1 repeat 254 288 IPR006597 -
Bva03g00760 679 Pfam Sel1 repeat 517 539 IPR006597 -
Bva03g00760 679 Pfam Sel1 repeat 551 585 IPR006597 -
Bva03g00760 679 Pfam Sel1 repeat 291 323 IPR006597 -
Bva03g00760 679 Pfam Sel1 repeat 135 170 IPR006597 -
Bva03g00760 679 Gene3D Tetratricopeptide repeat domain 443 608 IPR011990 GO:0005515
Bva03g00760 679 PANTHER ERAD-ASSOCIATED E3 UBIQUITIN-PROTEIN LIGASE COMPONENT HRD3A-RELATED 9 665 IPR044623 GO:0030433
Bva03g00760 679 PANTHER ERAD-ASSOCIATED E3 UBIQUITIN-PROTEIN LIGASE COMPONENT HRD3A-RELATED 9 665 - -
Bva03g00760 679 SUPERFAMILY HCP-like 120 200 - -
Bva03g00760 679 Gene3D Tetratricopeptide repeat domain 91 204 IPR011990 GO:0005515
Bva03g00760 679 Gene3D Tetratricopeptide repeat domain 217 328 IPR011990 GO:0005515
Bva03g00760 679 SMART sel1 326 362 IPR006597 -
Bva03g00760 679 SMART sel1 551 586 IPR006597 -
Bva03g00760 679 SMART sel1 290 325 IPR006597 -
Bva03g00760 679 SMART sel1 399 434 IPR006597 -
Bva03g00760 679 SMART sel1 515 550 IPR006597 -
Bva03g00760 679 SMART sel1 363 398 IPR006597 -
Bva03g00760 679 SMART sel1 135 170 IPR006597 -
Bva03g00760 679 SMART sel1 171 202 IPR006597 -
Bva03g00760 679 SMART sel1 253 289 IPR006597 -
Bva03g00760 679 Gene3D Tetratricopeptide repeat domain 329 442 IPR011990 GO:0005515
Bva03g00760 679 SUPERFAMILY HCP-like 344 474 - -
Bva03g00760 679 MobiDBLite consensus disorder prediction 42 56 - -
Bva03g00760 679 SUPERFAMILY HCP-like 446 587 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00760 Bva-Chr3 4536254 4540812 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00760 K14026 - rcu:8283119 1125.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00760 03 4536254 4540812 Bva03g00760 03 4536254 4540812 ECH