Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00755 ATGAAGAGAGGTGACTGGATGTGTCCAAAGTGCAATTTTATGAACTTCTCTAGAAATACGCAGTGCCTAAAATGTAATGAAGATAAACCTGAGAATACTAGCCCACCTGatgttgaaatgaagaaaggagATTGGATCTGCCCAGAATGcagttttatgaatttttctagAAATATGGAATGTCGAAAGTGCAAAGCAGTGGGGCCAAAGAGGGTCAACCCGGATGATGTTCCAATGAAAAAAGGAGACTGGAATTGTCCACGGTGTGGGTTCATGAATTTTTCTAGTAATAAGAAGTGTTTGCGATGTCCAGAGGAAAGGCCTGCGAGACAACTGAAACCTGGGGACTGGGAGTGTCCCAAGTGTGATTTCTTCAATTATGGGCCAAATCAACAAACAACACACATTCCAAATAATCTCgcaaaatattactttttaacaCCTTTCGCCAATTCCTTCTCTGCTTCTCTTGCGCTCTCTCCCTCGCTAGCTCTCTTGTTCAGAACTTTGCCCCCCTTCAGAAATTGGGTTGACGGGTG 539 0.397 MKRGDWMCPKCNFMNFSRNTQCLKCNEDKPENTSPPDVEMKKGDWICPECSFMNFSRNMECRKCKAVGPKRVNPDDVPMKKGDWNCPRCGFMNFSSNKKCLRCPEERPARQLKPGDWECPKCDFFNYGPNQQTTHIPNNLAKYYFLTPFANSFSASLALSPSLALLFRTLPPFRNWVDG 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00755 179 ProSiteProfiles Zinc finger RanBP2 type profile. 41 70 IPR001876 -
Bva03g00755 179 PANTHER ZINC FINGER PROTEIN 65 132 - -
Bva03g00755 179 SUPERFAMILY Ran binding protein zinc finger-like 2 32 IPR036443 -
Bva03g00755 179 Gene3D - 72 110 - -
Bva03g00755 179 Gene3D - 33 71 - -
Bva03g00755 179 Gene3D - 1 32 - -
Bva03g00755 179 Pfam Zn-finger in Ran binding protein and others 41 69 IPR001876 -
Bva03g00755 179 Pfam Zn-finger in Ran binding protein and others 3 26 IPR001876 -
Bva03g00755 179 Pfam Zn-finger in Ran binding protein and others 80 103 IPR001876 -
Bva03g00755 179 ProSiteProfiles Zinc finger RanBP2 type profile. 2 31 IPR001876 -
Bva03g00755 179 PANTHER ZINC FINGER PROTEIN 1 66 - -
Bva03g00755 179 SUPERFAMILY Ran binding protein zinc finger-like 34 69 IPR036443 -
Bva03g00755 179 ProSiteProfiles Zinc finger RanBP2 type profile. 80 109 IPR001876 -
Bva03g00755 179 SUPERFAMILY Ran binding protein zinc finger-like 72 109 IPR036443 -
Bva03g00755 179 PANTHER ASPARAGINE-RICH PROTEIN 65 132 - -
Bva03g00755 179 PANTHER ASPARAGINE-RICH PROTEIN 1 66 - -
Bva03g00755 179 ProSitePatterns Zinc finger RanBP2-type signature. 84 103 IPR001876 -
Bva03g00755 179 ProSitePatterns Zinc finger RanBP2-type signature. 6 25 IPR001876 -
Bva03g00755 179 SMART zf_4 82 106 IPR001876 -
Bva03g00755 179 SMART zf_4 4 28 IPR001876 -
Bva03g00755 179 SMART zf_4 43 67 IPR001876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00755 Bva-Chr3 4521540 4525340 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00755 1 64 EF-hand Containing Proteins AT1G55040 51.562 9.26e-18 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00755 - - csin:114258581 236.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00755 03 4521540 4525340 Bva03g00755 03 4521540 4525340 ECH