Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00752 ATGGCGTCTCAATCCGCCAATCTATGGGTACTCTTAACTCTCGGTTTGGCAGGAATTCTGTTGATGACAAGAAAGCTCAAGAAGGCCATCAAAGAAGACTTTGGCGCTTTTATCGAGAAGCTTCAGCTAGATCCACCTCCTCAGCCTGCTCCGCCTAAAGCTCCACACCCTCTTACTAACCTCACTTTTGCCGTTTCCGACGTGTTTGACGTAGATGGTCATGTAACCTCATTTGGCCATCCAGACTGGGCACGAACACATGAAGCTGCTTCTCGGACATCTCCTGCTGTTTCTGCTCTTGTTGAAGGAGGTGCAACTTGCATTGGAAGAACTGTTGTAGATGAGCTAGCATATGGTATCACTGGCGAAAATAAGCATTATGAAACACCGACCAATCCTGCTGTGCCTGCTCGAGTACCAGGTGGATCTTCTAGCGGTGCTGCCGTTGCTGTTGCTGCTAATCTGGTTGATTTCTCACTGGGCATTGATACTGTTGGAGGGGTGAGAGTACCTGCTGGATTTTGTGGCATTCTAGGATTTCGACCTTCACGTGGGGCTATTCCTCACACAGGATGCATACATGTTTCAACTAGTCTGGACACAATTGGTTTGTTTGCAAGGGATCCTAATATTTTGCATCGTGTTGGCCACATGCTACTGCCTGCATCATTTGTAGCTCAACGTAATCCTCGGCAAATAGTAATAGCTGATGATTGTTTTCAGCTTCTAAATGTTCCTCCTGACAGGAGTTCTCAGGTGGTGATTAAATCCACTGAGAAGCTTTTTGGAAAGCAAGTGTTGAAGCATATAAATCTTGAGGACTACTTAAGATCTAAACTTCTTAGCTTGAATGAGGTAACAAGCCAGAAAACGAATGGGGAACTGAAAGCTTCTTCATTAAAATTACTTGCCGATGCTATGCAGATTCTTCAAAGACATGAGTTCCGACTTATGCACAAGGAGTGGTTAAACACAGTAAAGCCTACAATTCATCCTGCCATCTCAACACAATTGCATGAAAGGTTGGAGGCATCTGATGCAGAAATTGAATACTACAAATCTGTTAGAGACGAGATGCGTGCTGCCatgaattctcttttgaaggATGAAGGGGTTTTGATTATCCCTACTGTCGCTGATCCTCCTCCTAAAGTGGGTGGGAAGGTATCTGAGGACTATCGGAGCCGTGCATTTAGTCTGCTTAGTGTTGCTAGCATCTCAGGTTGCTGTCAGATCACAATACCATTAGGATTTCATGACAAGTGTCCGGTTTCAGTGTCATTGATAGCTCGGCATGGTGGTGACCGCTTTTTACTGGACACGGTAAAGACCATGTATACAACTTTGCAAGAGCAGGCTGATAGTGCTGCCGAAACCAAATCATCAAAAAATGGCCCAAGTCGAGAAGAATCTGCTGAAATTGCCAAAGAGAAGGGAAATCAAGCGTTCAAAGACAAGCAGTGGCAGAAAGCTGTTGGATTTTATACAGAAGCTATCAAACTCAGTGGCAATAATGCAACATACTATAGTAACAGGGCTGCAGCATATCTTGAGCTCGGGAGTTTCCGTCAAGCTGAGGCAGATTGTACTAAAGCTATAGACCTTGACAAAAAGAATGTTAAGGCCTATCTACGAAGAGGTACTGCAAGAGAGATGCTACTCTATTATAAGGAGGCAAGTGATGATTTTAAATATGCTCTCGTACTTGAGCCAACAAACAAGAGGGCATCTTCGTCCGTTGAAAGATTGAGGATGCTATTCCGGTA 1766 0.44 MASQSANLWVLLTLGLAGILLMTRKLKKAIKEDFGAFIEKLQLDPPPQPAPPKAPHPLTNLTFAVSDVFDVDGHVTSFGHPDWARTHEAASRTSPAVSALVEGGATCIGRTVVDELAYGITGENKHYETPTNPAVPARVPGGSSSGAAVAVAANLVDFSLGIDTVGGVRVPAGFCGILGFRPSRGAIPHTGCIHVSTSLDTIGLFARDPNILHRVGHMLLPASFVAQRNPRQIVIADDCFQLLNVPPDRSSQVVIKSTEKLFGKQVLKHINLEDYLRSKLLSLNEVTSQKTNGELKASSLKLLADAMQILQRHEFRLMHKEWLNTVKPTIHPAISTQLHERLEASDAEIEYYKSVRDEMRAAMNSLLKDEGVLIIPTVADPPPKVGGKVSEDYRSRAFSLLSVASISGCCQITIPLGFHDKCPVSVSLIARHGGDRFLLDTVKTMYTTLQEQADSAAETKSSKNGPSREESAEIAKEKGNQAFKDKQWQKAVGFYTEAIKLSGNNATYYSNRAAAYLELGSFRQAEADCTKAIDLDKKNVKAYLRRGTAREMLLYYKEASDDFKYALVLEPTNKRASSSVERLRMLFR 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00752 588 PANTHER AMIDASE 1 1 587 - -
Bva03g00752 588 ProSiteProfiles TPR repeat profile. 506 539 IPR019734 GO:0005515
Bva03g00752 588 Gene3D Amidase signature (AS) domain 36 443 IPR036928 -
Bva03g00752 588 ProSiteProfiles TPR repeat profile. 540 573 IPR019734 GO:0005515
Bva03g00752 588 SUPERFAMILY TPR-like 471 582 IPR011990 GO:0005515
Bva03g00752 588 PANTHER OUTER ENVELOPE PROTEIN 64, CHLOROPLASTIC 1 587 - -
Bva03g00752 588 SUPERFAMILY Amidase signature (AS) enzymes 55 444 IPR036928 -
Bva03g00752 588 Gene3D Tetratricopeptide repeat domain 444 586 IPR011990 GO:0005515
Bva03g00752 588 MobiDBLite consensus disorder prediction 453 475 - -
Bva03g00752 588 SMART tpr_5 472 505 IPR019734 GO:0005515
Bva03g00752 588 SMART tpr_5 540 573 IPR019734 GO:0005515
Bva03g00752 588 SMART tpr_5 506 539 IPR019734 GO:0005515
Bva03g00752 588 Pfam Amidase 55 439 IPR023631 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00752 Bva-Chr3 4505583 4512998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00752 29 445 Acyl Lipid Metabolism Gene Families AT1G08980 49.765 6.78e-141 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00752 - - jre:118344722 870.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00752 03 4505583 4512998 Bva03g00752 03 4505583 4512998 ECH