Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00745 ATGGCCACAATGCTGAGACCACTTCTCGCCATCTTGTTTTGTACCATCCTCGTCTCCCACATTGCGGTACTTCAAGTGTCAGCGGCAGTGATAATACTATACAACAAGTGCCCACACCCTGTTTGGCCAGGAATCCAACCCAGCGCAGGAAAGCCCCTTTTAGCCCGCGGAGGTTTCAAGCTCCCACCAAACAAGGCCTACTCCCTTCGACTCCCTGCTCTCTGGTCGGGCCGCTTCTGGGGCCGTCACGGCTGCGCATTCGACGCGTCCGGCCGCGGCCGCTGCGCCACCGGAGACTGCGGCGGGTCCCTCTTCTGCAATGGCATCGGCGGAACCCCTCCGGCGACCCTGGCGGAGTTCACGCTGGGAAACGAGCAGGACTTCTACGACGTGAGCCTGGTGGATGGGTACAATTTGCCGATTTCCATAGCTCCTTTCAAGGGATCTGGGAAATGCAGCTACGCTGGGTGCGTTAGCGACCTGAACACCATGTGCCCGGTGGGGCTCCAGGTGAGGTCACGCGACGGCAAGAGAGTGGTGGCTTGTAAGAGTGCTTGCGCCGCTTTCAATTCTCCGAGGTATTGCTGTACGGGCAGCTATGGAAGCCCGCAGGCCTGCAAGCCGACGGCGTACTCGAGGATTTTCAAGACGGCTTGCCCAAAGGCTTATTCTTATGCCTACGACGATCCCACTAGCATTGCAACTTGCACCAGAGCTAACTATTTGATCACTTTCTGCCCTCACCATCGGCGCTG 755 0.5828 MATMLRPLLAILFCTILVSHIAVLQVSAAVIILYNKCPHPVWPGIQPSAGKPLLARGGFKLPPNKAYSLRLPALWSGRFWGRHGCAFDASGRGRCATGDCGGSLFCNGIGGTPPATLAEFTLGNEQDFYDVSLVDGYNLPISIAPFKGSGKCSYAGCVSDLNTMCPVGLQVRSRDGKRVVACKSACAAFNSPRYCCTGSYGSPQACKPTAYSRIFKTACPKAYSYAYDDPTSIATCTRANYLITFCPHHRR 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00745 251 Gene3D Thaumatin 29 247 IPR037176 -
Bva03g00745 251 PANTHER THAUMATIN-LIKE PROTEIN 8 249 - -
Bva03g00745 251 Pfam Thaumatin family 35 247 IPR001938 -
Bva03g00745 251 SMART tha2 31 247 IPR001938 -
Bva03g00745 251 CDD TLP-PA 30 246 - -
Bva03g00745 251 ProSiteProfiles Thaumatin family profile. 28 249 IPR001938 -
Bva03g00745 251 PANTHER OS03G0233200 PROTEIN 8 249 IPR001938 -
Bva03g00745 251 PRINTS Pathogenesis-related protein signature 127 143 IPR001938 -
Bva03g00745 251 PRINTS Pathogenesis-related protein signature 30 42 IPR001938 -
Bva03g00745 251 PRINTS Pathogenesis-related protein signature 91 120 IPR001938 -
Bva03g00745 251 PRINTS Pathogenesis-related protein signature 78 89 IPR001938 -
Bva03g00745 251 PRINTS Pathogenesis-related protein signature 237 246 IPR001938 -
Bva03g00745 251 SUPERFAMILY Osmotin, thaumatin-like protein 30 248 IPR037176 -
Bva03g00745 251 PIRSF PR5 1 251 IPR001938 -
Bva03g00745 251 ProSitePatterns Thaumatin family signature. 91 106 IPR017949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00745 Bva-Chr3 4454468 4455607 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00745 9 248 Receptor kinase-like Gene Family AT5G38280 45.344 2.09e-64 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00745 - - gmx:100784636 460.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00745 03 4454468 4455607 Bva03g00745 03 4454468 4455607 ECH