Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00722 ATGGCCGACGGACTCGTTTTGCGCGGCACCATGCGTGCTCACACCGACATGATCACCGCCATTGCCTGCCCAGTCGATAACAGCGACATGATTGTTACCTCTTCCCGCGATAAATCTATCATTTTGTGGCATCTTACCAAGGAGGAGAAGACTTACGGTGTGCCCCGCCGCAGGCTGACGGGTCACTCTCACTTTGTTCAGGACGTCGTCCTATCCTCTGATGGCCAGTTCGCTCTTTCGGGGTCCTGGGACGGCGAGCTCAGACTCTGGGACTTGGCAGCCGGCACCTCCGCTCGCAGATTTGTGGGCCACACCAAGGACGTTCTCTCCGTTGCTTTCTCCATTGATAACCGTCAGATCGTCTCGGCTTCCCGCGACCGTTCCATTAAGCTCTGGAACACTCTTGGTGAGTGCAAGTACACAATTCAGGATAGTGATGCCCACTCTGATTGGGTTAGCTGTGTTCGTTTCAGCCCGAGCACCCTTCAACCCACTATAGTTTCCGCATCCTGGGACCGAACCGTGAAAGTTTGGAATTTGACTAACTGTAAGCTGAGAAACACCCTCGCCGGCCACACTGGGTATGTCAACACGGTGGCTGTTTCTCCTGATGGATCGCTTTGCGCTAGTGGTGGCAAAGATGGGGTGATCTTGCTCTGGGATTTGGCTGAGGGAAAGAGGCTGTACTCACTCGATGCTGGATCTATCATTCATGCTCTGTGCTTCAGTCCCAACAGGTACTGGCTCTGTGCTGCTACTGAGCAGAGTATCAAGATTTGGGATTTGGAGAGCAAGAGCATAGTTGAGGATTTGAGGGTTGACCTCAAGACTGAAGCTGAAAGGGCTGATGTCACAGCTGCCAATACCGCAAAGAAGAAGGTTATCTACTGTACAAGTTTGAGCTGGAGTGTTGATGGAAGCACATTGTTTAGTGGCTACACTGACGGTGTGGTCAGAGTTTGGGGTATTGGACGTTATTA 980 0.5214 MADGLVLRGTMRAHTDMITAIACPVDNSDMIVTSSRDKSIILWHLTKEEKTYGVPRRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAAGTSARRFVGHTKDVLSVAFSIDNRQIVSASRDRSIKLWNTLGECKYTIQDSDAHSDWVSCVRFSPSTLQPTIVSASWDRTVKVWNLTNCKLRNTLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGSIIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLRVDLKTEAERADVTAANTAKKKVIYCTSLSWSVDGSTLFSGYTDGVVRVWGIGRY 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00722 326 ProSiteProfiles Trp-Asp (WD) repeats profile. 298 326 IPR001680 GO:0005515
Bva03g00722 326 PRINTS G protein beta WD-40 repeat signature 166 180 IPR020472 -
Bva03g00722 326 PRINTS G protein beta WD-40 repeat signature 208 222 IPR020472 -
Bva03g00722 326 PRINTS G protein beta WD-40 repeat signature 120 134 IPR020472 -
Bva03g00722 326 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 145 182 - -
Bva03g00722 326 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 189 226 - -
Bva03g00722 326 ProSiteProfiles Trp-Asp (WD) repeats profile. 101 133 IPR001680 GO:0005515
Bva03g00722 326 SUPERFAMILY WD40 repeat-like 7 323 IPR036322 GO:0005515
Bva03g00722 326 ProSitePatterns Trp-Asp (WD) repeats signature. 208 222 IPR019775 -
Bva03g00722 326 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 59 92 - -
Bva03g00722 326 ProSiteProfiles Trp-Asp (WD) repeats profile. 145 188 IPR001680 GO:0005515
Bva03g00722 326 Pfam WD domain, G-beta repeat 99 133 IPR001680 GO:0005515
Bva03g00722 326 Pfam WD domain, G-beta repeat 55 91 IPR001680 GO:0005515
Bva03g00722 326 Pfam WD domain, G-beta repeat 235 261 IPR001680 GO:0005515
Bva03g00722 326 Pfam WD domain, G-beta repeat 9 43 IPR001680 GO:0005515
Bva03g00722 326 Pfam WD domain, G-beta repeat 298 321 IPR001680 GO:0005515
Bva03g00722 326 Pfam WD domain, G-beta repeat 187 221 IPR001680 GO:0005515
Bva03g00722 326 Pfam WD domain, G-beta repeat 139 179 IPR001680 GO:0005515
Bva03g00722 326 ProSiteProfiles Trp-Asp (WD) repeats profile. 59 100 IPR001680 GO:0005515
Bva03g00722 326 ProSiteProfiles Trp-Asp (WD) repeats profile. 189 230 IPR001680 GO:0005515
Bva03g00722 326 SMART WD40_4 287 322 IPR001680 GO:0005515
Bva03g00722 326 SMART WD40_4 94 133 IPR001680 GO:0005515
Bva03g00722 326 SMART WD40_4 182 221 IPR001680 GO:0005515
Bva03g00722 326 SMART WD40_4 224 261 IPR001680 GO:0005515
Bva03g00722 326 SMART WD40_4 52 91 IPR001680 GO:0005515
Bva03g00722 326 SMART WD40_4 4 44 IPR001680 GO:0005515
Bva03g00722 326 SMART WD40_4 135 179 IPR001680 GO:0005515
Bva03g00722 326 ProSitePatterns Trp-Asp (WD) repeats signature. 166 180 IPR019775 -
Bva03g00722 326 ProSiteProfiles Trp-Asp (WD) repeats profile. 11 53 IPR001680 GO:0005515
Bva03g00722 326 CDD WD40 7 321 - -
Bva03g00722 326 ProSitePatterns Trp-Asp (WD) repeats signature. 78 92 IPR019775 -
Bva03g00722 326 PANTHER RECEPTOR FOR ACTIVATED PROTEIN KINASE C RACK1 3 326 IPR045223 GO:0015935|GO:0043022
Bva03g00722 326 PANTHER GUANINE NUCLEOTIDE-BINDING PROTEIN SUBUNIT BETA-LIKE PROTEIN 3 326 - -
Bva03g00722 326 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 101 133 - -
Bva03g00722 326 Gene3D - 4 326 IPR015943 GO:0005515
Bva03g00722 326 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 290 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00722 Bva-Chr3 4324570 4326583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00722 140 323 Miscellaneous Gene Families AT5G08390 25.269 1.97e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00722 K14753 - jre:108997770 629.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00722 03 4324570 4326583 Bva03g00722 03 4324570 4326583 ECH