Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00709 ATGGCAGCAATTGCGGTACCCAAACCACGATCTTCGAAAACTGAGTCGTACGTCGACAACAAGCGCAAGGAGGACATTCGCCATGCGAATATCGTCGCTGCTCGAGCCGTCGCCGATGCGGTTAGAACCAGTCTGGGTCCGAAGGGTATGGACAAGATGATTTCCACTGCTTCCAGCGAAGTCATCATCACCAATGATGGTGCCACTATTCTGAACAAGATGGAAGTCCTTCAACCTGCTGCCAAAATGCTCGTTGAGCTCTCCAAGTCCCAGGATGCTGCTGCTGGTGACGGTACTACCACAGTGGTCGTTATCGCGGGTGCTCTGCTTGAGCAATGCCTTTTGCTCCTGTCACATGGCATTCATCCAACTGTCATTTCGGATTCGCTTCACAAGGTATCGTTTAAGGCCATTGATGTGCTTACTGCTATGGCTGTACCTGTTGAGCTTTCTGACCGTGAGTCTTTGATAAAATCTGCCAGCACTTCGCTTAATAGCAAAGTGGTCAGTCAGTACTCTACGCTACTGGCACCTCTTGCTGTTGACGCTGTGTTATCTGTTGTGGACCCAGCTAAGCCCGACATGGTTGATCTTCGCGATATCAAGATTGTGAAGAAGCTTGGTGGGACAGTGGATGACACGGAGCTAGTGAAGGGGTTGGTGTTTGATAAGAAGGTTAGTCACGCTGCTGGAGGACCTACACGCATGGAAAATGCAAAGATTGCTGTGATTCAATTCCAGATTTCTCCACCCAAGACCGACATTGAGCAGAGTATAGTGGTTAATGACTACACCCAAATGGATAGAATATTGAAGGAAGAAAGGAATTATATTTTGGGtatgattaagaaaattaaggcAACGGGTTGTAATGTGCTATTGATTCAGAAGAGTATACTGAGAGATGCTGTGACTGACTTATCTCTGCATTACCTTGCAAAAGCAAAAATCTTGGTGATTAAGGATGTTGAGCGAGATGAGATTGAATTCATCACAAAGACTCTGAATTGTTTGCCTATTGCAAATATTGAGCATTTCCGTGCTGAGAAGTTAGGGTATGCAAATCTTGTAGAGGAGATTTCTCTTGGGGATGGGAAGATTGTTAAGATTACTGGTATCAAGGATATGGGAAGGACCACAACCGTGCTTGTTCGTGGATCAAACCAGTTAGTGATTGATGAAGCTGAGCGGAGTTTGCATGATGCTTTGTGTGTTGTTAGATGTTTGGTCAACAAGAGGTTTTTGATTGCTGGAGGTGGTGCTCCAGAGATCGAGCTGTCAAGGCAATTGCGTGCCTGGTCTAAGGTGTTGCATGGGATGGAGGGTTACTGCGTCCGACATTTTGCTGAGGCTCTTGAAGTGATTCCTTATACTCTAGATGAGAATGCAGGTTTGAACTCAATTGCAATTGTTACTGAGCTGAAGAATCGACACGCACAGGGTGAAATAAATGCTGGAATTAATGTGAGGAAGGGGCAGATTACCAACATTTTAGAGGAGAATGTGGTGCAGCCCCTGCTTGTGAGCACAAGCGCAATCACATTAGCGACAGAGTGTGTGCGGATGATTTTGAAGATTGACGATATTGTAACTGTGAGGTA 1601 0.4535 MENAKIAVIQFQISPPKTDIEQSIVVNDYTQMDRILKEERNYILGMIKKIKATGCNVLLIQKSILRDAVTDLSLHYLAKAKILVIKDVERDEIEFITKTLNCLPIANIEHFRAEKLGYANLVEEISLGDGKIVKITGIKDMGRTTTVLVRGSNQLVIDEAERSLHDALCVVRCLVNKRFLIAGGGAPEIELSRQLRAWSKVLHGMEGYCVRHFAEALEVIPYTLDENAGLNSIAIVTELKNRHAQGEINAGINVRKGQITNILEENVVQPLLVSTSAITLATECVRMILKIDDIVTVR 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00709 298 Gene3D - 179 295 IPR027413 -
Bva03g00709 298 SUPERFAMILY GroEL apical domain-like 1 151 IPR027409 -
Bva03g00709 298 Pfam TCP-1/cpn60 chaperonin family 1 296 IPR002423 GO:0005524
Bva03g00709 298 PRINTS Tailless complex polypeptide 1 (chaperone) signature 146 168 IPR017998 GO:0140662
Bva03g00709 298 PRINTS Tailless complex polypeptide 1 (chaperone) signature 180 192 IPR017998 GO:0140662
Bva03g00709 298 Gene3D - 143 178 IPR027410 -
Bva03g00709 298 PANTHER T-COMPLEX PROTEIN 1 SUBUNIT DELTA 1 296 - -
Bva03g00709 298 SUPERFAMILY GroEL-intermediate domain like 141 176 IPR027410 -
Bva03g00709 298 Gene3D GroEL 1 142 IPR027409 -
Bva03g00709 298 SUPERFAMILY GroEL equatorial domain-like 178 296 IPR027413 -
Bva03g00709 298 PANTHER CHAPERONIN 1 296 IPR017998 GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00709 Bva-Chr3 4245742 4247714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00709 20 192 EF-hand Containing Proteins AT3G14270 25.654 3.92e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00709 K09496 - pvy:116105957 555.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00709 03 4245742 4247714 Bva03g00709 03 4245742 4247714 ECH