LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva03g00693	ATGGAGTCAACTGGGTTATGCTTGCGCTCACCATCGCACACTTCCCTCTTGTGCTCTGCTCGCCTTTTCACCCAGAATCCAAATAGGTTCCAAATTTCTTGGTGCTTTGCAAAAAAGTCAGGTGCTTCTGCTAAAAAAATGGCGGCTACGACACCTGCCGCAACAACCACAAGCTTTGGGTTTAAGAATTTGTTGGAAACGGTTCTGGTTGATGTGCAAAAAGCAGAGAACAGACCATTGAACGTGCCCTTGATTGCTCCCTTTACGATCGCTTCTTCAAGATTGGACAAGGTGGAGAATGTGGCAATCAGAGTTGAGTTGAGTAATGGGTCAGTGGGGTGGGGTGAAGCACCAATTTTGCCGTTTGTTACTGCAGAGGATCAACCCACGGCCATGGCTAAGGCTGCTGAGGCATGCCAGTTTTTGCGGCGAACCCCGGCACTAACGTTGGGTTCGATGCTGGGGGAGATTGCTGGTATTCTTCCCGGGCATGAGTTTGCTTCGGTTAGGGCGGGGGTGGAGATGGCATTAATTGACGCCGTTGCTAATAGTATTCGGGTGCCACTCTGGAGACTTTTTGGTGGAGCTTCAAATACAATAGCTACTGATATCACAATCCCAATTGTTTGTCCTACTGAAGCAGCTAAATTGGCTTCAAAGTATCGCAAAGAAGGATTTAAGACTTTGAAGCTCAAAGTGGGCAAGAATCTGAATGCAGACATAGAAGTTCTTCAAGCCATACGTGTTGCCCACCCTGAATCTGTGTTTATCCTGGATGCTAATGAGGGATATAACCCTAAGAAAGCTGTGGAAGTTCTTGAAAAATTACATGAAATGGGGGTCACTCCTGTGCTGTTTGAGCAACCAGTTCACAGAGATGATTGGGAAGGTCTTGGATATGTTAGTAATATAGCAAGAGACAGGTATGGTGTATCTGTTGCAGCTGATGAGAGTTGCCGGAGTTTAGATGATGTTTACAGGATTGTTGAAGGAAATCTTGCAAATGTAATTAACATTAAGCTCTCCAAAGTTGGGGTTATGGGTGCCCTTAATATTATTGAAGTGGCAAAAGCAGCTGGATTAAATTTGATGATTGGTGGTATGGTTGAGACAAGGCTGGCTATGGGTTTTGCTGGCCACCTTGCTGCTGGGCTTGGATGTTTCAAGTTCATTGACCTAGATACACCTCTTCTACTGTCGGAAGATCCAGTTCTTGAGGGCTATGAAGTTTCAGGTGCCACTTATAAGTTCACAAATGCCAGAGGCCAAGGAGGTTTTCTTCATTGGGATAATATTGCGTGGTA	1304	0.4548	MESTGLCLRSPSHTSLLCSARLFTQNPNRFQISWCFAKKSGASAKKMAATTPAATTTSFGFKNLLETVLVDVQKAENRPLNVPLIAPFTIASSRLDKVENVAIRVELSNGSVGWGEAPILPFVTAEDQPTAMAKAAEACQFLRRTPALTLGSMLGEIAGILPGHEFASVRAGVEMALIDAVANSIRVPLWRLFGGASNTIATDITIPIVCPTEAAKLASKYRKEGFKTLKLKVGKNLNADIEVLQAIRVAHPESVFILDANEGYNPKKAVEVLEKLHEMGVTPVLFEQPVHRDDWEGLGYVSNIARDRYGVSVAADESCRSLDDVYRIVEGNLANVINIKLSKVGVMGALNIIEVAKAAGLNLMIGGMVETRLAMGFAGHLAAGLGCFKFIDLDTPLLLSEDPVLEGYEVSGATYKFTNARGQGGFLHWDNIAW	434

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva03g00693	434	Pfam	Enolase C-terminal domain-like	215	424	IPR029065	-
	Bva03g00693	434	SUPERFAMILY	Enolase C-terminal domain-like	185	432	IPR036849	-
	Bva03g00693	434	SMART	MR_MLE_2	211	308	IPR013342	-
	Bva03g00693	434	PANTHER	O-SUCCINYLBENZOATE SYNTHASE-RELATED	55	433	-	-
	Bva03g00693	434	SUPERFAMILY	Enolase N-terminal domain-like	72	195	IPR029017	-
	Bva03g00693	434	CDD	L-Ala-DL-Glu_epimerase	74	399	IPR034603	GO:0016855
	Bva03g00693	434	PANTHER	O-SUCCINYLBENZOATE SYNTHASE	55	433	-	-
	Bva03g00693	434	Gene3D	-	186	411	IPR036849	-
	Bva03g00693	434	SFLD	muconate cycloisomerase	73	404	-	-
	Bva03g00693	434	Pfam	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain	83	194	IPR013341	-
	Bva03g00693	434	SFLD	o-succinylbenzoate synthase	73	404	-	-
	Bva03g00693	434	Gene3D	-	79	185	IPR029017	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva03g00693	-		-	gmx:100793110	668.307

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bva03g00693	03	4144284	4146728	Bva03g00693	03	4144284	4146728	ECH