Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00643 ATGCTATGTTCCAAAGAAGAAGCTCTTGTTAGACTCTTCTACAATGCCTCTAGCTCTTTCCAGCTCCTcatcctctttctcttctcctctGCCATTTTGCTCTTCAAGTTCTTGAACTTCGTTGGCAGCTACCCCTTAATCCAAAGGGATCAGGATTATGAGTACGTTTTtactgaagatgaagaagaagaagaagaggaggaaacAGATGAGATATATTCTCACGTTGAGACTTCTGCAGAGAGAGATCATCTTGTGGCAGACATCATCTGTGGTGGAGAAACCCTTTTGTTTCTGCACAAGGAAGAGCCTCAAAGGACTCACTCTTTCTCTGAATTAGAGTTCATAAGCCCCCAGGAGAGCCTAATTGAAGAATCAGAAGAGAACTGTGCCTCTGAGACTTTGTCAGTTCACAACTCACCACTAGTTTCTGATTTTGAAACTGAAAAATCATATACGGTTGAAGGAGAATTTCCAGCAAGAGATGCTGATTCTCTTCCAAATTCTGTCCCAGTCGAAAGCAGGACCACTGTGAATCTGTACAAAAGTGACTTAGCAGACAATGCCAAAAACTATGACGaaAATCATGTTGTTGCtggaattattaaaaacaagaagGTGCAGGAGGCAAAGGTCACAGGGGATGACAGATTCTATGTTATCGCGCCAACCCGGAGGTTGGAAACAAACAAGTTGGTTGTTGAAGATAgggatgatgatgaagaaatatatgGTGATTCGTGCACTGTTGGCTCTACATCTAAGAGCTCCTCTGAATGGAGGAGCTCCATTAAAGATTCTGGCACCGAAgaccctttttcttcttcttcaagaaGAAGTTGCCCCAAGTGGGAATCGTACGCAGTGTTCCAGAAATATGATGAAGAAATGACATTCCTAGACAGAATCAGTGCACAGAAACTTCAAGAAActgAGTCTTTAAGATCCATTCAGATATCTCCAAGATCAGTTTCAGAGCGAATTATGTACAAGATTTCAAGTATAAATAAGAAACCAGCTGATATACGTCACAACCCATATGGTGAACTGGAGGCTGCATATGTAGCACAAATTTGCTTGACATGGGAGGCTCTTAATTGGAATTACAAGGATTTTCAATCCAAAAAGGCTTCGCGCCAAGATCTCGATGCTGGTTGTCCAGCCTCCATTGCACAGAAATTCCAGCAATTTCAAGTTCTGTTGCAGAGATACATTGAGAATGAACCTTATGAGCATGGCAGGAGACCTGAGGTCTATGCAAGAATGAGGCTTTTGGCTCCAAAATTGCTCTTAGTGCCAGAATACAGAGATTCAGAGGATGATGAGAAGGACCAAGGTTTTCACTCTAGGATATCGTCAGCTTCATTTCTTATGATAATGGAAGATGGCATCAGAacatttatgaattttctcAAGGCtgataaagaaaaaccatGTCAAATTCTAGCAGCCTACTTTAGGAGAAACCGTAGAGCCACAGTTGATCCAACACTACTTCAGCTTATGAAGAAAGTTAATCAAAAGAAAAAGATTAAGGTTAAAGATCTTCGCCGTTCTGGCAAATGTTTGAGGAAGAGGAAGCTAAAGGTGGAAGAAGAGATGGAGATCTTGATGGCTCAGATAGACCTAAAAGTGGTGTCAAGGGTTTTGAGGATGAGTAGTTTAAGTGAAGAACAGCTGCAGTGGTGTGAAGAGAAGATGAGCAAAGTGAGAGTGATGGATGGGAAGCTTCAAAGAGATTCCTCTCCACTTTTCTTCCCTGCACATTG 1769 0.3838 MLCSKEEALVRLFYNASSSFQLLILFLFSSAILLFKFLNFVGSYPLIQRDQDYEYVFTEDEEEEEEEETDEIYSHVETSAERDHLVADIICGGETLLFLHKEEPQRTHSFSELEFISPQESLIEESEENCASETLSVHNSPLVSDFETEKSYTVEGEFPARDADSLPNSVPVESRTTVNLYKSDLADNAKNYDENHVVAGIIKNKKVQEAKVTGDDRFYVIAPTRRLETNKLVVEDRDDDEEIYGDSCTVGSTSKSSSEWRSSIKDSGTEDPFSSSSRRSCPKWESYAVFQKYDEEMTFLDRISAQKLQETESLRSIQISPRSVSERIMYKISSINKKPADIRHNPYGELEAAYVAQICLTWEALNWNYKDFQSKKASRQDLDAGCPASIAQKFQQFQVLLQRYIENEPYEHGRRPEVYARMRLLAPKLLLVPEYRDSEDDEKDQGFHSRISSASFLMIMEDGIRTFMNFLKADKEKPCQILAAYFRRNRRATVDPTLLQLMKKVNQKKKIKVKDLRRSGKCLRKRKLKVEEEMEILMAQIDLKVVSRVLRMSSLSEEQLQWCEEKMSKVRVMDGKLQRDSSPLFFPAH 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00643 589 MobiDBLite consensus disorder prediction 243 280 - -
Bva03g00643 589 PANTHER DUF1666 FAMILY PROTEIN 1 589 - -
Bva03g00643 589 MobiDBLite consensus disorder prediction 247 280 - -
Bva03g00643 589 Pfam Protein of unknown function (DUF1666) 349 587 IPR012870 -
Bva03g00643 589 PANTHER DNA LIGASE (DUF1666)-RELATED 1 589 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00643 Bva-Chr3 3874170 3877541 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00643 - - gsj:114425724 840.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00643 03 3874170 3877541 Bva03g00643 03 3874170 3877541 ECH