Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00634 ATGGCTCGAATATTCGAGTATTTTGTGGTCTGCGGGATCGGCCCAGAGATTCGAACCCTTGATGGAAACAGAGGGTACCATGGTACTGGTTATATGTatcttccttctcttctcGACCAGTTCCCTCCTCCGGACCACTCTCTCTACCCTCCTCCACCTCCTCAGCTTCCCACATGTGTTCTACCAGCTGGTGTGGAGTTTTATTCATCTGGCTTTGATGCCAATATCCCTTCCACATTTCCAAGGAGCTATCCAATTGTTTTAACTGAGGGTGATGgttcaaaaatatatgttagttGCATTTCTTTCCGGGATCCAGTCTGTGAGGATATTGCAGAGGCTTACCGAATACCAGCAAATTCTTTCGCTGAAAAATGTATCTGTCTAGTCTCACGCTCGCCAAGTTTCAAACTACTTAGGAATGCACTAGAGGAAATATTTTCACTGTGTTTTTCTCAAAATGGAATTAGCAAGCCATTATGGGATGTCATAGCACATATGGCGTCCAATGTACCTTTACCAACTCCTGGAAAGGAGCGAGTTTTATTTGCTGTTGAGAATTGTCTACTTACAGTGGAGTCTCTGCCAAATGACGGTCTCCCCTATGTTGAGATATCATTTCAGCCTCTGGTTCAGTGCTTGGATGTTGACAACTTAATAAGACTTTTTACAGCAGTTTTGCTTGAGAGGAGGATTTTGCTTCGAGCAAACAAGTATTCTCTTTTAACTCTTGTATCAGAGGCCATTTGCCACTTAATCTACCCATTCCGATGGCAGCATGTCTACATTCCGTTGCTATTTTTCAGTGGAGTAGACTATATTGATGCTCCTACACCATATATGATGGGCCTCCACTCTGGTGTTGATACCTCTGTTCTGGCAATGGATGGTGTAGTCGTTGTGGACCTTGAGTATAATCGTATCACTACATCAGAGGAAATACCACCTATTCCAGAGCCAGAATTCAGTTTTTTGCGTGGGGAGATAATGAAGTTATTATATCCCAATGTAGTTGGCATTGATGAAATGAAGAATGGAATGTACATTGTATCTGAGCATCATCCTAAATTAGGAGCAAAGCAATGGGGAGAGGATCATGACCTTCAGCTAAGGTTAATATTCCTGAAGTTCTTTGCAACACTTTTAAGTGGTTATCGCAACTTCATAGAAAATAGTGCAACTCATGTCTTCAACACTCAAGCTTTTTTGAAGAAACGCTCTAGATCTACTAACCAACCACCAGAGCCCATGaTAGCACAATTTCTAGACTCTCATGGTTTCTTGGATTATTTGGAGAGGGGTTTAGGATCAGGTGAAAACAGCAATAACCTACTTGATAAGCTACAAGATGCAATTGGAAGGGGCCAAAATCCTATGTCAATTCTTCCATCGTCTTTGCAAGAGCCTGATATTATAACAATATCAGAATCTGATGTTGGAATATCAGGATCTGGTGCCAAATATACGTATGATAGGTTTCCTGCAAACCTCAGAACAGaagaacatgaagaaaaaaggaagcagATTCTTGCAGCAGTCAGTAATGCCTTTGAATACTCAGGAAGGCATACTCCAAGTTCACCTTCTGTGTTGGGCAGTAAGGATCCTATAGCAGATAGTCTTAGTCCACTGGAGAGAGCTGCAGAAAGGGAACGAATGGTGTTGGACATTAAAGTTAAGCTGCAGGGTCTCTGGTTGCGGCTTCTTAAACTGGGAGCCACAGATGATCCGCTTTCATCCTTTGAATATGGAACAAtacttgCTTTGATTGAATCTGATGCGGAGGGGATCGGTGGTAGTGGGTTTGTTGAATGCATAAGGGAGCATATACATTCAGGGTGGCACTGTCAGCTCACTGAAGAACAGTTTATTGCAGTAAAAGAATTGCTCAAAACAGCCATCAATCGTGCAACGTCACGGAATGACTTGCTGACTATTAGAGACGCCCTTGAAGTTTCTTCTGAGATGTATAAGAAAGACATTAATAATGTCAGGGACTATGTCCAACGCCatcttatttctctttctatttggGAGGAGCTAAGGTTTTGGGAAGGATATTTTGACTATTTAATGGAGCAATCTTCAAATGCGCCAGCCAACTATGCATCTTTGGTTACTGCACAGCTTGTCGTGGTGGCATCACACATGGCTGGGTTGGGACTTCCTCATAATGATGGTTGGTACATGATCGAAACAATAGCTGAGAAAAACAGCATTGGATCCAAGCAATTTATAAAACTCAAGGGGTTCTTGTCACATATTCAGCAACTCCAAAATAGTTATTGGGGAATAACTTCGATGAAGGCACAATCTGTATCAGCCCTTGGATTACCATCTCCTCATGCAAAAGATGTCAAAAGTGATGACCACCAACCTACTGAGGCAACCGGGCGAAGCTGGGTTCAAAGCATGTTCAGTAGAGATACAGCATCCAGATCCAGCTCATCCAGTCGTAAATGGACTTCTGATGGTGACAGTTCAGCTGCAAATGAGAATGGGACTCCTCGCAAGCAAGATTTATCAACTGCAGGACAGAAGAAGCTTCAAACCAGTGTTCGTATACTGAGGGGTCATAATGGTGCCATTAGCGCTCTCCATTGTGTTACAAAGAGAGAGGTGTGGGATTTAGTGGGTGACCGTGAAGATGCTGGTTTCTTTATCAGTGGAAGCACAGACTGCTCAGTTAAGATCTGGGATCCTAGTCTTCGGGGTTCTGAATTAAGGGCAACTTTGAAAGGACATACAAGAACTGTCCGTGCTATAAGTTCAGATAGAGGAAAGGTGGTGTCAGGGTCTGATGATCAGTCTGTCTTAGTGTGGGATAAGCAGACTACTCAGCTTCTAGAAGAGCTTAAAGGCCATGATGCATCAGTTAGCTGTGTGCGCATGCTCCCAGGCGAACGTGTTCTTACTGCTTCCCATGATGGAACTGTGAAAATGTGGGATGTTAGAACTGATACTTGTGTTGCAACTGTTGGTCGTTACTCTAGTGCAGTCCTATGTATGGAATATGATGACAATGCAGGAATCTTGGCTGCTGCTGGAAGAGATGTGGTTGCTAACATATGGGACATTCGTGCGGGTAGGCAGATGCATAAGCTTTTAGGGCATACACAATGGATACGGTCCATAAGAATGGTTGGCGATACTGTAATTACTGGTAGTGACGATTGGACAGCAAGGATATGGTCTGTTTCTCGAGGAACATGTGATGCTGTTCTAGCATGCCATGCAGGGCCAATTTTATGCGTTGAGTATTCTTCTTTAGACAAAGGAATAATAACAGGTTCAACTGATGGTCTGGTCCGATTTTGGGAAAATGATGATGGAGGGATAAGGTGCGCAAAAAATTTAACGATACACAATTCTACCATATTATCTATCAATGCCGGGGAACACTGGTTAGGAATTGGAGCAGCCGATAATTCTATGTCTCTCTTTCATCGGCCACAAGAGAGACTTGGTGGCTTTTCTGGTACTGGATCCAAGACAAGTGGTTGGCAGCTTTACAGAACACCTCAAAGAACTGTGGCAAtgGTAAGATGTATTGCTTCGGACTTGGAGAGGAAAAGGATATGCAGCGGTGGTCGTAATGGACTTCTAAGGCTGTGGGATGCCACCATTAACATTTG 3635 0.4237 MARIFEYFVVCGIGPEIRTLDGNRGYHGTGYMYLPSLLDQFPPPDHSLYPPPPPQLPTCVLPAGVEFYSSGFDANIPSTFPRSYPIVLTEGDGSKIYVSCISFRDPVCEDIAEAYRIPANSFAEKCICLVSRSPSFKLLRNALEEIFSLCFSQNGISKPLWDVIAHMASNVPLPTPGKERVLFAVENCLLTVESLPNDGLPYVEISFQPLVQCLDVDNLIRLFTAVLLERRILLRANKYSLLTLVSEAICHLIYPFRWQHVYIPLLFFSGVDYIDAPTPYMMGLHSGVDTSVLAMDGVVVVDLEYNRITTSEEIPPIPEPEFSFLRGEIMKLLYPNVVGIDEMKNGMYIVSEHHPKLGAKQWGEDHDLQLRLIFLKFFATLLSGYRNFIENSATHVFNTQAFLKKRSRSTNQPPEPMIAQFLDSHGFLDYLERGLGSGENSNNLLDKLQDAIGRGQNPMSILPSSLQEPDIITISESDVGISGSGAKYTYDRFPANLRTEEHEEKRKQILAAVSNAFEYSGRHTPSSPSVLGSKDPIADSLSPLERAAERERMVLDIKVKLQGLWLRLLKLGATDDPLSSFEYGTILALIESDAEGIGGSGFVECIREHIHSGWHCQLTEEQFIAVKELLKTAINRATSRNDLLTIRDALEVSSEMYKKDINNVRDYVQRHLISLSIWEELRFWEGYFDYLMEQSSNAPANYASLVTAQLVVVASHMAGLGLPHNDGWYMIETIAEKNSIGSKQFIKLKGFLSHIQQLQNSYWGITSMKAQSVSALGLPSPHAKDVKSDDHQPTEATGRSWVQSMFSRDTASRSSSSSRKWTSDGDSSAANENGTPRKQDLSTAGQKKLQTSVRILRGHNGAISALHCVTKREVWDLVGDREDAGFFISGSTDCSVKIWDPSLRGSELRATLKGHTRTVRAISSDRGKVVSGSDDQSVLVWDKQTTQLLEELKGHDASVSCVRMLPGERVLTASHDGTVKMWDVRTDTCVATVGRYSSAVLCMEYDDNAGILAAAGRDVVANIWDIRAGRQMHKLLGHTQWIRSIRMVGDTVITGSDDWTARIWSVSRGTCDAVLACHAGPILCVEYSSLDKGIITGSTDGLVRFWENDDGGIRCAKNLTIHNSTILSINAGEHWLGIGAADNSMSLFHRPQERLGGFSGTGSKTSGWQLYRTPQRTVAMVRCIASDLERKRICSGGRNGLLRLWDATINI 1211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00634 1211 PRINTS G protein beta WD-40 repeat signature 1052 1066 IPR020472 -
Bva03g00634 1211 PRINTS G protein beta WD-40 repeat signature 970 984 IPR020472 -
Bva03g00634 1211 PRINTS G protein beta WD-40 repeat signature 929 943 IPR020472 -
Bva03g00634 1211 MobiDBLite consensus disorder prediction 776 846 - -
Bva03g00634 1211 ProSitePatterns Trp-Asp (WD) repeats signature. 1012 1026 IPR019775 -
Bva03g00634 1211 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1075 1107 - -
Bva03g00634 1211 ProSiteProfiles Trp-Asp (WD) repeats profile. 993 1034 IPR001680 GO:0005515
Bva03g00634 1211 Pfam uDENN domain 35 103 IPR005113 -
Bva03g00634 1211 Pfam WD domain, G-beta repeat 1070 1106 IPR001680 GO:0005515
Bva03g00634 1211 Pfam WD domain, G-beta repeat 852 900 IPR001680 GO:0005515
Bva03g00634 1211 Pfam WD domain, G-beta repeat 910 942 IPR001680 GO:0005515
Bva03g00634 1211 Pfam WD domain, G-beta repeat 1030 1065 IPR001680 GO:0005515
Bva03g00634 1211 Pfam WD domain, G-beta repeat 947 983 IPR001680 GO:0005515
Bva03g00634 1211 ProSiteProfiles Tripartite DENN domain profile. 18 442 IPR037516 -
Bva03g00634 1211 CDD WD40 852 1148 - -
Bva03g00634 1211 SMART DENN_cls 122 306 IPR001194 -
Bva03g00634 1211 Gene3D - 1 176 - -
Bva03g00634 1211 ProSiteProfiles Trp-Asp (WD) repeats profile. 912 951 IPR001680 GO:0005515
Bva03g00634 1211 ProSiteProfiles Trp-Asp (WD) repeats profile. 952 992 IPR001680 GO:0005515
Bva03g00634 1211 Gene3D - 202 387 IPR043153 -
Bva03g00634 1211 SMART dDENN_cls 366 434 IPR005112 -
Bva03g00634 1211 ProSitePatterns Trp-Asp (WD) repeats signature. 1193 1207 IPR019775 -
Bva03g00634 1211 ProSiteProfiles Trp-Asp (WD) repeats profile. 882 900 IPR001680 GO:0005515
Bva03g00634 1211 ProSiteProfiles Trp-Asp (WD) repeats profile. 1075 1107 IPR001680 GO:0005515
Bva03g00634 1211 ProSitePatterns Trp-Asp (WD) repeats signature. 970 984 IPR019775 -
Bva03g00634 1211 Gene3D - 823 1015 IPR015943 GO:0005515
Bva03g00634 1211 SMART WD40_4 1112 1149 IPR001680 GO:0005515
Bva03g00634 1211 SMART WD40_4 905 942 IPR001680 GO:0005515
Bva03g00634 1211 SMART WD40_4 849 900 IPR001680 GO:0005515
Bva03g00634 1211 SMART WD40_4 986 1025 IPR001680 GO:0005515
Bva03g00634 1211 SMART WD40_4 945 983 IPR001680 GO:0005515
Bva03g00634 1211 SMART WD40_4 1068 1107 IPR001680 GO:0005515
Bva03g00634 1211 SMART WD40_4 1028 1065 IPR001680 GO:0005515
Bva03g00634 1211 SMART WD40_4 1167 1206 IPR001680 GO:0005515
Bva03g00634 1211 ProSiteProfiles Trp-Asp (WD) repeats profile. 1035 1074 IPR001680 GO:0005515
Bva03g00634 1211 MobiDBLite consensus disorder prediction 795 846 - -
Bva03g00634 1211 Gene3D - 1016 1210 IPR015943 GO:0005515
Bva03g00634 1211 Pfam DENN (AEX-3) domain 123 304 IPR001194 -
Bva03g00634 1211 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 952 986 - -
Bva03g00634 1211 PANTHER DENN DOMAIN-CONTAINING PROTEIN 3 3 1211 - -
Bva03g00634 1211 SUPERFAMILY WD40 repeat-like 853 1207 IPR036322 GO:0005515
Bva03g00634 1211 PANTHER C-MYC PROMOTER BINDING PROTEIN 3 1211 - -
Bva03g00634 1211 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 912 942 - -
Bva03g00634 1211 SMART uDENN_cls 1 104 IPR005113 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00634 Bva-Chr3 3765958 3781923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00634 951 1126 Acyl Lipid Metabolism Gene Families AT3G18860 24.339 2.07e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00634 - - gmx:100818305 2108.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00634 03 3765958 3781923 Bva03g00634 03 3765958 3781923 ECH