Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00628 ATGGAAGCTGCATTTTGCAGTCGCCTTACTCTTTCGCCCAACCAACTTTTGAATGCTCCGAGTCTCGgatataaaaattttctttttaaatataggaAAGATCGGAGTTTTCTAATGAGAGCTTCGGCCACTGCATTAGGGAAAGGTGGTGGCTTGTTGGAGAGGCCAACAATAGAGACGACAACGCCTGGTCGTGAATCTGAGTTTGACTTGAGGAAATCAAGAAAAACATCCCCTCCTTACCGAGTACTGCTGCATAATGATAATTACAACAAGCGGGAATATGTTGTGCAAGTATTGATGAAGGTGATACCGGGAATGACACTTGATAATGCCGTGAACATCATGCAAGAGGCGCACTATAATGGCATGTCAGTGGTAATCATCTGTGCCCAGGTAGACGCAGAGGAGCACTGCATGCAGTTAAGAGGAAATGGTCTTCTAAGTTCAATCGAGCCAGCTGATGGTGGGTGTTG 476 0.4391 MEAAFCSRLTLSPNQLLNAPSLGYKNFLFKYRKDRSFLMRASATALGKGGGLLERPTIETTTPGRESEFDLRKSRKTSPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEEHCMQLRGNGLLSSIEPADGGC 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00628 158 PANTHER ATP-DEPENDENT CLP PROTEASE ADAPTER PROTEIN CLPS1, CHLOROPLASTIC 1 158 IPR022935 GO:0006508
Bva03g00628 158 Gene3D - 75 153 IPR014719 -
Bva03g00628 158 PANTHER ATP-DEPENDENT CLP PROTEASE ADAPTOR PROTEIN CLPS 1 158 - -
Bva03g00628 158 MobiDBLite consensus disorder prediction 53 73 - -
Bva03g00628 158 SUPERFAMILY ClpS-like 75 152 IPR014719 -
Bva03g00628 158 Pfam ATP-dependent Clp protease adaptor protein ClpS 76 144 IPR003769 GO:0030163
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00628 Bva-Chr3 3725389 3727337 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00628 K06891 - gmx:100785379 264.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00793 04 5177527 5179560 Bva03g00628 03 3725389 3727337 ECH
Bva03g00628 03 3725389 3727337 Bva03g00628 03 3725389 3727337 ECH