Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00627 ATGGCCTCCACCACATCCGCGTGCTCTGTCTCGCTCAAGCGCCATTCGTTCCACTTCTTCATCTGCTGCAAGCCAACTGTTCCTCCAAGCTTCTCCATTGGTCCCGCAGATTCTTCCTCCTCATCATCATCGTCATTATCTACAGGCTCTTTCAGCCGTAGGTGGTACAATCCTctgaagcaaagaaaatttgatcGGGCTCCAGAAATTGAACGCCATTGGGTTGAAGCCGATCAACCCGTCGCATCCCCTGAGAGATTCACTGTGGTGTCATATAACATACTGGCCGATAGAAATGCTTTTAAACACACAGATTTATACTCAAATCTTCCGTCTTATTACCTGAAGTGGGATCGTCGAAAGAGGGTTATTTGTGAGGAACTATTCGAATGGGACTCGGATATAATCTGTTTACAGGAGGTGGacaaatattttgatctttcagTCATTTTGGAAAAAGAAGGATACGAAGGATCTTACAagAGACGCACTGGAGACTCCGTTGATGGTTGTGCGATGTTTTGGAAAACTGATAAGTTCCGGTTGTTAGATGAAGAGAGCATTGAATTTAAGGGCATTGGTCTTCGTGATAATGTTGCTCAACTTTTAGTTTTTGAGACATTTGAATCTGACTCAAGAAGACTAATTGTTGGTAACATCCATGTACTTTATAACCCAAACCGAGGAGAAGTTAAACTAGGTCAAaTTCGTTTTCTCTTGTCAAAAGCACGTATGCTTTCAGAGAAATGGGGTGACGCCCCTGTTTTGCTTGCTGGTGATTTTAACAGTACTCCTCAGAGTGGAATATACAAGTTCCTGTCATCATCTGAGGGATGTGGTCTACCATTGCAGCTGAATATCATGTTATATGACAGAAGGGAGTTATCTGGACAGAAAAGTTGTCATCCTGCACAAGTCTTGGGCAATAAAAAAGAGACAGTCAGTTCATTTATCTTAATGGACAGACTGTTAAATTGCTGGACAGATGAAGAATTAACAGTTGCCACTGGAAATTCTGAGCGTCATTTGGTTGAGCATCCATGGAAACTTAGCAGTTCTTATGCCACAGTTAAGGGTCCATCAGGTACTCGGGGATTCAATGATGAACCCTTAGCAACTACATATCACTCCAAGTTTCTTGGTACTGTAGATTACTTATGGTACTCAGACGGTATTGTACCTACAAGAGTTCTGGATACTGTCCCAATTGATATGCTCCAGAGGACAGGTGGTCTTCCATGCAAGAGAGTGGGAAGTGATCACTTGGCGTTGGTTTCTGaatttctcttctcaaatACCGACGATACtacaaaagaaatagttgCAGCAGCAGCATCAGCATTGACCGGACAAGAAAATCTGCAAGTATA 1370 0.4095 MASTTSACSVSLKRHSFHFFICCKPTVPPSFSIGPADSSSSSSSSLSTGSFSRRWYNPLKQRKFDRAPEIERHWVEADQPVASPERFTVVSYNILADRNAFKHTDLYSNLPSYYLKWDRRKRVICEELFEWDSDIICLQEVDKYFDLSVILEKEGYEGSYKRRTGDSVDGCAMFWKTDKFRLLDEESIEFKGIGLRDNVAQLLVFETFESDSRRLIVGNIHVLYNPNRGEVKLGQIRFLLSKARMLSEKWGDAPVLLAGDFNSTPQSGIYKFLSSSELNIMLYDRRELSGQKSCHPAQVLGNKKETVSSFILMDRLLNCWTDEELTVATGNSERHLVEHPWKLSSSYATVKGPSGTRGFNDEPLATTYHSKFLGTVDYLWYSDGIVPTRVLDTVPIDMLQRTGGLPCKRVGSDHLALVSEFLFSNTDDTTKEIVAAAASALTGQENLQV 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00627 449 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 37 425 - -
Bva03g00627 449 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 3 37 425 - -
Bva03g00627 449 Gene3D Endonuclease/exonuclease/phosphatase 61 439 IPR036691 -
Bva03g00627 449 SUPERFAMILY DNase I-like 80 424 IPR036691 -
Bva03g00627 449 Pfam Endonuclease/Exonuclease/phosphatase family 90 414 IPR005135 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00627 Bva-Chr3 3720009 3724592 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00627 87 275 EF-hand Containing Proteins AT5G54130 30.288 1.81e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00627 - - aip:107630317 618.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00627 03 3720009 3724592 Bva03g00627 03 3720009 3724592 ECH