Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00457 ATGTCGACCGCAACCATCAACGGCCTCTGCCTCTCCTCCTCCATTTCTCCGGCCAAAACCTCCCTCAGAAGAACCACATTACGCCCATCTTGCATAGTTGCAAGgctctcttctccttcttcttcttcatcatcttcctcttcttctttcccttctctCATCCAAGACAGACCTGTCTTTGCTGCTCCTGAACCCATCATCAACCCCATTTTGAGAGAGGACATGGGAAAGGACTACGAAGAAGCTATTGAGGCACTGAAGAAGCTGCTAATTGAGAAGGGTGAGCTTAAAGCCTCTGCAGCTGCAAAAGTTGAGCAGATAACTGCTGAATTGTCCGGACCATCATCGGATGGCATCCCAGGCTCTGCGGCCGTGGACAGGATCAAAACTGGTTTCCTTCACttcaagagagagaaatatgaCAAGAACCCAGCTTTGTATGGTGAACTTGCCACAGGCCAGAGCCCACCATATATGGTGTTTGCTTGCTCAGACTCAAGGGTGTGCCCATCTCATGTGCTAGATTTCCAGCCAGGAGAGGCCTTTGTGGTCAGAAATGTTGCCAACATAGTCCCGCCATACGATCAGACAAAATACTCTGGAACTGGGGCTGCCATTGAGTATGCAGTCTTGCACCTCAAGGTGCAAAACATTGTGGTCATTGGGCACAGTGCTTGCGGTGGTATTAAGGGGCTTCTGTCTTTTCCATTTGATGGAACCTATTCTACTGAGTTCATTGAAGAATGGGTCAAAATTGGGTTACCTGCGAAGGAAAGGGTGAAATCAAAACATGGCGATGCACCTTTTGGAGAGCTGTGCACACACTGTGAGAAGGAAGCTGTGAATGTTTCCCTTGGAAACCTGCTAACCTACCCATTTGTGAGAGAAGGATTGGTGAACAAAACTTTGGCACTGAAGGGAGGATACTATGACTTCGTTAAAGGAAGTTTTGAGCTCTGGGGCCTTCACTTTGACCTTCAATCTTCTTTCTCTGTAAAAGACGTGGCCACCATCCTGCATTGGAAGCTATA 1031 0.4491 MSTATINGLCLSSSISPAKTSLRRTTLRPSCIVARLSSPSSSSSSSSSSFPSLIQDRPVFAAPEPIINPILREDMGKDYEEAIEALKKLLIEKGELKASAAAKVEQITAELSGPSSDGIPGSAAVDRIKTGFLHFKREKYDKNPALYGELATGQSPPYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKYSGTGAAIEYAVLHLKVQNIVVIGHSACGGIKGLLSFPFDGTYSTEFIEEWVKIGLPAKERVKSKHGDAPFGELCTHCEKEAVNVSLGNLLTYPFVREGLVNKTLALKGGYYDFVKGSFELWGLHFDLQSSFSVKDVATILHWKL 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00457 343 PANTHER CARBONIC ANHYDRASE 1 332 IPR001765 GO:0004089|GO:0008270
Bva03g00457 343 Pfam Carbonic anhydrase 158 316 IPR001765 GO:0004089|GO:0008270
Bva03g00457 343 SMART Pro_CA_2 151 321 IPR001765 GO:0004089|GO:0008270
Bva03g00457 343 Coils Coil 72 99 - -
Bva03g00457 343 PANTHER BETA CARBONIC ANHYDRASE 2, CHLOROPLASTIC 1 332 - -
Bva03g00457 343 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 163 170 IPR015892 GO:0004089|GO:0008270|GO:0015976
Bva03g00457 343 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 207 227 IPR015892 GO:0004089|GO:0008270|GO:0015976
Bva03g00457 343 SUPERFAMILY beta-carbonic anhydrase, cab 125 326 IPR036874 GO:0004089|GO:0008270
Bva03g00457 343 Gene3D Carbonic anhydrase 114 332 IPR036874 GO:0004089|GO:0008270
Bva03g00457 343 CDD beta_CA_cladeB 131 320 IPR045066 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00457 Bva-Chr3 2665240 2668206 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00457 K01673 - gmx:100781868 521.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00457 03 2665240 2668206 Bva03g00457 03 2665240 2668206 ECH
Bva08g01323 08 6922202 6930563 Bva03g00457 03 2665240 2668206 ECH
Bva11g01138 11 12527577 12532203 Bva03g00457 03 2665240 2668206 ECH