Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00315 ATGGTTTTGGGCTTGAGAGCAAAGAACAGGACAAGTCCCACTGTTCAAATCAACTATCTCATTCATATTCAGGAGATCAAGCCTTGGCCCCCTTCTCAAGCTCTCAGATCTCTTCGTTCTGTATTGATACAATGGGAAAATGGTGAACGCCGTTCAGGTTCTACCAATCTTGTTGTTCCCTCACTTGGTTCTGTTATAGGGGAAGGGAGAATCGAATTTAATGAATCCTTTAGACTTCCTGTTACTCTATTGAGAGATTTGTCTGTCAGAGGTGGTGATGCTGATGTATTCCAAAAGAATTGCTTGGAGTTCAACCTGTATGAGCCTCGAAGAGATAAGACTAAAGGTCAGTTGTTGGGGACTGCCATCATAGACTTGGCAGATTATGGAATACTGAAAGAGGCCTTGAGCATTAGTGCTCCTTTGAACTGCAAGAGGAGCTATAGAAACACAGATCAGCCACTTTTGTTCATTAAAATTCAGCCTGTTGAAAAAGGTCGCACCAACTCCTCATCAAAGGAGAGCTTGTCAAAAGACAATAATGGTGGCGATTCTGTGTCAGCACTGATGAATGAAGAATATGCTGAGGAAGCTGAGATTGCCTCTTTCACTGATGATGATGTTTCTTCACATTCATCTACGGCAATAGCTTCTACTCTTGAGTCCAATGGGTGTATACCTCCTGGACTTGAAGAGAACGGACAACATGGACTAGTTCATGACGCTGATAGGAATGGCAAGGAGCATCCCCGGGAATCAGAAAAAAGGTTTGATAAATCAAACATGATGCCACAAGATAAACATGATAATCTGGGGACGAGTTCATCATGCATGACATCAATAGATCAATCATCTGATGGTGGGAGTTTAGTAAATGGTGATGCTTCTTTGTCTAATTCTCCTAGTCATAGTTCAGTAAACCATGATGCTTCTCACATCAATGACAAATTTACTGGGAGATATGAGGAAGCTgatgaatattttttgaagGAGGGAGTAAGTGATGCATTGTACTGTAGTTCTATTGAGGATAAACAAGCAAATGGAAAATCTAACTTGGATGAGCAGAACGATGCAGAAGATGAACCATCAGTAGCACAAGGTGCCAAAGATCACATCTTATTAAGTAACAGTGCCTATTCTATTGGTGGAGTTATTGGTGAGAAGGGAAATATtctgaaaaatgaaagtttaaAGCCTATGAAGTCTGTGAGATCACCAGCAGACTCAGCTAGGAGTGTTGGATCACTTGGTAGCAATCATCATCCAGAAGTAAAGGAAAGTGTTGTTGTTGGAGATGCACAGAACAGTTGGGGGAACATCAGAGGCAGTGATAAAAAAGATTCAAAGATTTATCCGAAGGAAGTAAGGAGTGCAATTTTAGAAAGCAAAATTCAGCACTTAGAAAACAAGATAAAGATGCTTGAAGGAGAGTTAAGAGAAGCAGCTGCTATTGAGGCTGCTTTGTATTCAGTAGTTGCTGAGCATGGAAGCTCCATGAACAAGGTCCATGCCCCAGCTCGGCGCCTTTCTAGGTTGTATCTTCATACTTGTAAAGAAAAACTTCAATCAAGAAGGGCTGGGGCAGCTAAAAGTGCTGTTTCAGGGTTAGTTCTTGTTTCAAAGGCATGTGGAAATGATGTTCCAAGGTTGACATATTGGTTGTCCAATTCTATTGTATTGAGAATAATTATATCCCAAACCACCAAAGAGGCCGTGCCATCATTTTCTGCTGGATCtagaatgaaaggaaaaagtgaGGTAGAAGGGAGAAGCAAGATGACACCCTTGTTCCAATGGAAGGGATCCTCTCCCAGGAAAACTGGAAATACAACAATTGAGTGTGAAGGGTTCGGCAACTGGGATGATCCCCATGTATTCACATCAGCATTGGAAAAAATAGAAGCTTGGATATTCTCTCGCATTGTGGAATCTATCTGGTGGCAGACTTTGACTCCTCATATGCAGCATGCAAAGGTCACTAATAAGGAGGATGTAAGTTCTGCCTTGAGGAAAAGCTCCAGAAGGATTTCTAGCTCACATGACCAAGAACAGGGAATATTTTCTCTAGATATTTGGAAGAGCGCCTTTAGGGAAGCCTGTGAAAGGCTTTGTCCCATTCGAGCTGGAGGGCATGAGTGTGGCTGTCTGCCTGTGCTGTCTAGATTGATAATGGAGCAGTGTGTGGCGAGATTAGATGTAGCTATGTTCAATGCTATTCTTCGTGAATCCGCTGATGAAATCCCAACTGATCCTGTGTCAGATCCCATTAGTGATCCTAAGGTTCTCCCAATCCCACCGGGAAAATCAAGCTTTGGAGCTGGTGCTCAACTGAAAAATGCGATTGGGACCTGGTCTATATGGCTAACTGACTTATTTGGTATGGATGATGATGACTCAATCGAAGATAATGATGATGCTGATAGCAATGCTGACAGACAAAATACATCGTTCAAGTCCTTCCATCTTCTCAATGCGCTAAGTGATCTCCTGATGCTTCCTAAGGATATGCTGTTTAGTCAATCCATCAGGAATGAGGTATGTCCAATGTTTAGTGCATCACTTATCAAGAGGATTCTCGACAATTTTGTCCCAGATGAGTTTTGCCCTGATCCAATTCCCACTGCTGTCCTTGAAGCTCTGAACTCAGAGGAAGATTTCCAGGATGGCTATGAGTCTGTCAAAATCTTCCCATGCATAGCAACTCCCATTGTCTATTTACCTCCTTCAGCATCTTCTATTGCAAGCATTACTGGGGAAATCGGGAACAAATCTCAGCTTAGAAGAAGTAGATCTTCTGTGATCAGGAAGGCGTATACCAGCGATGATGAGCTCGATGAATTAACCTCCCCTTTCTCGTTAATAGACTTTGATAGTTCCATGTCCCCTTCAGTTTCAACAAAGCGCAGCTGGAAgtcaaaagaaattcaaagcgATTCTGCTGTCAGATATGAACTCCTCAGGAAGGTGTGGATGAACAGCGAGTA 2987 0.4155 MVLGLRAKNRTSPTVQINYLIHIQEIKPWPPSQALRSLRSVLIQWENGERRSGSTNLVVPSLGSVIGEGRIEFNESFRLPVTLLRDLSVRGGDADVFQKNCLEFNLYEPRRDKTKGQLLGTAIIDLADYGILKEALSISAPLNCKRSYRNTDQPLLFIKIQPVEKGRTNSSSKESLSKDNNGGDSVSALMNEEYAEEAEIASFTDDDVSSHSSTAIASTLESNGCIPPGLEENGQHGLVHDADRNGKEHPRESEKRFDKSNMMPQDKHDNLGTSSSCMTSIDQSSDGGSLVNGDASLSNSPSHSSVNHDASHINDKFTGRYEEADEYFLKEGVSDALYCSSIEDKQANGKSNLDEQNDAEDEPSVAQGAKDHILLSNSAYSIGGVIGEKGNILKNESLKPMKSVRSPADSARSVGSLGSNHHPEVKESVVVGDAQNSWGNIRGSDKKDSKIYPKEVRSAILESKIQHLENKIKMLEGELREAAAIEAALYSVVAEHGSSMNKVHAPARRLSRLYLHTCKEKLQSRRAGAAKSAVSGLVLVSKACGNDVPRLTYWLSNSIVLRIIISQTTKEAVPSFSAGSRMKGKSEVEGRSKMTPLFQWKGSSPRKTGNTTIECEGFGNWDDPHVFTSALEKIEAWIFSRIVESIWWQTLTPHMQHAKVTNKEDVSSALRKSSRRISSSHDQEQGIFSLDIWKSAFREACERLCPIRAGGHECGCLPVLSRLIMEQCVARLDVAMFNAILRESADEIPTDPVSDPISDPKVLPIPPGKSSFGAGAQLKNAIGTWSIWLTDLFGMDDDDSIEDNDDADSNADRQNTSFKSFHLLNALSDLLMLPKDMLFSQSIRNEVCPMFSASLIKRILDNFVPDEFCPDPIPTAVLEALNSEEDFQDGYESVKIFPCIATPIVYLPPSASSIASITGEIGNKSQLRRSRSSVIRKAYTSDDELDELTSPFSLIDFDSSMSPSVSTKRSWKSKEIQSDSAVRYELLRKVWMNSE 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00315 995 MobiDBLite consensus disorder prediction 236 265 - -
Bva03g00315 995 ProSiteProfiles C2 NT-type domain profile. 7 164 IPR019448 -
Bva03g00315 995 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 1 995 IPR021827 GO:0005643
Bva03g00315 995 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 16 132 IPR019448 -
Bva03g00315 995 PANTHER EEIG1/EHBP1 PROTEIN AMINO-TERMINAL DOMAIN PROTEIN 1 995 - -
Bva03g00315 995 Coils Coil 458 485 - -
Bva03g00315 995 MobiDBLite consensus disorder prediction 401 421 - -
Bva03g00315 995 MobiDBLite consensus disorder prediction 166 186 - -
Bva03g00315 995 MobiDBLite consensus disorder prediction 266 308 - -
Bva03g00315 995 MobiDBLite consensus disorder prediction 220 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00315 Bva-Chr3 1872401 1878392 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00315 - - gmx:100775183 1182.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01825 04 18994452 19000766 Bva03g00315 03 1872401 1878392 BWGD
Bva03g00315 03 1872401 1878392 Bva03g00315 03 1872401 1878392 ECH