Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00220 ATGCTAAGGATTGCAGCTAAGAggctttcttctctctcttcgtCTTCATGGAGGGCCAACCAGGCCGCATCGGCGCTCGTCTCGCGGAACCCCGTAATAGGCGGTGGTCTTTCCTCTTCTGGTGAAAACAGATCCAGTGGTTGTTCTGACTCTTTTTTCCTTAGACCGGAGTTCCTTGTTCCCTTCAGAGGTTTTGCTACTGAGTCACTGATccatacaaaagaaaacagcCTTATTCCAGAGATTCCAGCGACTGTTGCAGCTGTTAAGAATCCTACTTCAAAGATAGTTTATGATGAATACAACCATGAACGGTTTCCTCCAGGTGACCCAAGCAAGAGGGCATTTGCTTATTTTGTCCTAACAGGTGGTAGATTTGTCTATGCCTCTCTTGTCCGTCTGCTTATTCTTAAGTTTGTGCTCAGTATGTCAGCCAGTAAGGATGTTCTTGCTCTGGCTTCAATTGAGGTTGATCTCTCCAGCATTGAGCCAGGCAGTACAGTGACTGTTAAGTGGCGTGGAAAGCCAGTGTTCATCAGGCGACGAACAGAGGATGACATTAAGCTGGCAAACAGTGTTGATGTTGGATCTCTTCGTGATCCCCAGCAGGATGCTGAGAGAGTCAAGAATCCAGAATGGCTGATTGTGATTGGGGTTTGCACGCATTTGGGTTGCATTCCCTTGCCTAATGCAGGTGACTTCGGTGGATGGTTTTGCCCGTGCCATGGTTCACATTATGATGTTTCTGGCAGAATTAGGAAGGGGCCAGCACCATATAATCTGGAGGTGCCAACTTACACCTTCTTGGAGGAGAACAAGTTGATGATTGGTTG 833 0.4526 MLRIAAKRLSSLSSSSWRANQAASALVSRNPVIGGGLSSSGENRSSGCSDSFFLRPEFLVPFRGFATESLIHTKENSLIPEIPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASIEVDLSSIEPGSTVTVKWRGKPVFIRRRTEDDIKLANSVDVGSLRDPQQDAERVKNPEWLIVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLEENKLMIG 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00220 277 SUPERFAMILY ISP transmembrane anchor 88 150 - -
Bva03g00220 277 SUPERFAMILY ISP domain 139 276 IPR036922 GO:0051537
Bva03g00220 277 Pfam Rieske [2Fe-2S] domain 160 263 IPR017941 GO:0051537
Bva03g00220 277 Pfam Ubiquinol cytochrome reductase transmembrane region 110 148 IPR004192 GO:0008121
Bva03g00220 277 Gene3D - 146 277 IPR036922 GO:0051537
Bva03g00220 277 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 187 275 IPR017941 GO:0051537
Bva03g00220 277 PANTHER CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL 1 277 - -
Bva03g00220 277 TIGRFAM Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 127 277 IPR006317 GO:0008121
Bva03g00220 277 CDD Rieske_cytochrome_bc1 154 277 - -
Bva03g00220 277 PANTHER CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL 1 277 IPR014349 GO:0051537
Bva03g00220 277 PRINTS Rieske 2Fe-2S subunit signature 249 261 IPR005805 GO:0016020|GO:0051537
Bva03g00220 277 PRINTS Rieske 2Fe-2S subunit signature 237 249 IPR005805 GO:0016020|GO:0051537
Bva03g00220 277 PRINTS Rieske 2Fe-2S subunit signature 215 226 IPR005805 GO:0016020|GO:0051537
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00220 Bva-Chr3 1343116 1345579 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00220 K00411 - qsu:112020957 451.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01912 04 19444381 19447412 Bva03g00220 03 1343116 1345579 BWGD
Bva03g00220 03 1343116 1345579 Bva03g00220 03 1343116 1345579 ECH