Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00200 atggaGCCGGTTGTAGCCAAGAGGCTGCGGAATGTGTTGAGGATCACCTTCTTCATGGTCCGGAAGGGTCTGATATCAAAGAGGAAGCTGATTATGGACATGAActtgatgatgaagaaaggGAAGCTGCTCAGAAAATCTCTGAGCAATCTCATGTCatctcatcatcatcattccAAGAGCGTAGCACGTGGTAGCTATGGGTTACAGGAGTATGAATTCTCTTGCAGCAACAGCCCCAATCCTGTTTTTTTCCATGTGCATAAGCGCAAGCACCATTTCAACTTCCCCTGCATCAATGCCCCTGAAGTTATTGAAGAAGAACCTAAATTAACAGCATTACAAAGTGAAGATCCCAAGGCTGTGGTTTTGGTGCCAAAGACCCCAGAGTACACTTTCAACTTTAGATTTGATGCATCTGATTTTGCTCCAGGAGAGAAGAAAAGTCCGCTGCTTTCACCATTTTCTGTGAGGATATCCAATTATTCATCGGAAGATGAAAATGAGCAAGGTGGAAATAGTCAAGTTGATGACCAAGCTGAGGATTTCATCAGAAGGTTCTATGAACAATTAAGGAATCAAAGCCGAGTACAATTACTGCAATACCCAGAGATGTA 617 0.4036 MEPVVAKRLRNVLRITFFMVRKGLISKRKLIMDMNLMMKKGKLLRKSLSNLMSSHHHHSKSVARGSYGLQEYEFSCSNSPNPVFFHVHKRKHHFNFPCINAPEVIEEEPKLTALQSEDPKAVVLVPKTPEYTFNFRFDASDFAPGEKKSPLLSPFSVRISNYSSEDENEQGGNSQVDDQAEDFIRRFYEQLRNQSRVQLLQYPEM 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00200 205 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 2 204 - -
Bva03g00200 205 PANTHER OS01G0930500 PROTEIN 2 204 - -
Bva03g00200 205 Pfam Cotton fibre expressed protein 175 205 IPR008480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00200 Bva-Chr3 1230016 1231109 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00200 - - tcc:18601169 306.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01931 04 19552469 19553568 Bva03g00200 03 1230016 1231109 BWGD
Bva03g00200 03 1230016 1231109 Bva03g00200 03 1230016 1231109 ECH