Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00199 ATGAAGAATAGAGCATCCCTTTTGCTGAAGCCGATGATTGCTGCTCTGAGCTCAATGGCCAAGTCAAAAACTTTGGCTATCAAGACCAAGACAAACGCCATCAAAGCACGTTTGATTATATTCTCGTTGTTGCGGAACAGGAAGTTTCTAATGAGCTCCATCTCCCATAAGTTCCAATCTGTTCTGGGTCATCACTCTCAtcccaaagaagaaaactttttGGAAGATGGGAATGATGAGAGCAAGCCCATTGTGAATTTCAATAGCAATGCTCGCTCCTACGAGGCCTTGCCGAATCCCAGTGAAACCCAGGTGGCTGAAGAAGACAGAGTTCCATTTTGCTTTAAAAGTTACAACAggtatgaagatgaagaggaaGGTGATGAAGATAGAAAATACCCGGATCTCACGCACTCGCTCTTTGAGTCAGAGGATTTGGATTTTGGAGGGTCTGTCATTGACCATGTGAAGAATTCAAAGGAAGAGGCAGGGCAAGAGTTCAAATTGGAAGACGAGATAGACCGTGCAGCTGACCTTTTCATAAGGAAATTCCGCAGGCAGATGATTTTACAGAAGCAAAACTCTCTTAAGAGGTGCCAAGAGATGCTGGAGATGGGTGCCTG 623 0.4222 MKNRASLLLKPMIAALSSMAKSKTLAIKTKTNAIKARLIIFSLLRNRKFLMSSISHKFQSVLGHHSHPKEENFLEDGNDESKPIVNFNSNARSYEALPNPSETQVAEEDRVPFCFKSYNRYEDEEEGDEDRKYPDLTHSLFESEDLDFGGSVIDHVKNSKEEAGQEFKLEDEIDRAADLFIRKFRRQMILQKQNSLKRCQEMLEMGA 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00199 207 Pfam Cotton fibre expressed protein 170 203 IPR008480 -
Bva03g00199 207 PANTHER EMB|CAB67623.1-RELATED 1 205 - -
Bva03g00199 207 PANTHER COTTON FIBER PROTEIN 1 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00199 Bva-Chr3 1223206 1223829 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00199 - - gmx:100807332 249.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01932 04 19561152 19562106 Bva03g00199 03 1223206 1223829 BWGD
Bva03g00199 03 1223206 1223829 Bva03g00199 03 1223206 1223829 ECH