Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02579 ATGTCAGGGCCACCCAGAGTTCGATACATGAACGTTGCCGACCCCGAGTCCCGGCCTGTACTTGCTCCCGCCGGTAATAAGGCTCAGACAAACGATGTGCGGAAACCTGCTTCCAAACCGGTGAAGAAGTCAGAAAAAGCACTTCAAGAAGCCAAGGCCAAGGAGAAAAAGCCAATTGCTCATTCAATTCCGCAATGTGTTTCAGTACCGACAATTTTGAAGCGGCAGGATCATCACCAAGTTTTACTCAATTTGTCAATGAATGCTTCGTGCTCATCAGATGCGTCATCAACAGATTCGTCAACTCACAGTCGCGCGTCATCAAGCGGGAATGTGGTCAGGCGGGTCGGTGCACCACTGAGGAAGAAGCAATCTGGTACAAAGTTGGAGAAGGTTGAAAAGGTTTGCACTCATAATGTGGCTGCTTCTGATACAGTACTGCCAGGCTCAACTGATAGCTTGGAGGGCAAGAAAAGGTGTGCTTGGGTTACAGCAAATACGGACCCATGTTATGTTGCCTTTCATGATGAAGAGTGGGGAGTTCCTATTCATGATGACAAAAAGCTGTTCGAGTTGCTTAGCCTCTCTGGAGCTTTGGCTGAACTTACATGGCCCACCATTCTTAGCAAAAGGCAGTTATTTTGGGAAGTCTTCTTGGAATTTGATCCAATTGCTGTTTCGCaagttaatgaaaaaaaaatagttgcaCCAGGAAGCCCCGCCAGCTCCTTACTATCAGAGCACAGACTGCGAGCCATAATTGAAAATGCACGTCAGATTTGTAAGGTAGCTGATGAGTTTGGCTCCTTCCACGCATTTATTTGGGACTTTGTCAACCATAAGCCTATAGTCAGCCAGTTCCGATACCCCCGTCAGGTACCCGTCAAATCTCCAAAGGCAGAAGTCATAAGCAAAGAACTTATGAGGAGAGGCTTCAGGAGTGTGGGGCCGACTGTTATCTATACATTCATGCAAGTGGCTGGACTAACAAATGACCATCTTATCAGTTGCTTCAGATTCAAGGAGTGTATAGCCAACGCAGAAGCAGTGGAGGAAGATGGCTCCCTCAACTCTAAGgtgaagaaggagaaagtaAATGAGGAGCCAAGCGAAGCGAGGTG 1121 0.4603 MSGPPRVRYMNVADPESRPVLAPAGNKAQTNDVRKPASKPVKKSEKALQEAKAKEKKPIAHSIPQCVSVPTILKRQDHHQVLLNLSMNASCSSDASSTDSSTHSRASSSGNVVRRVGAPLRKKQSGTKLEKVEKVCTHNVAASDTVLPGSTDSLEGKKRCAWVTANTDPCYVAFHDEEWGVPIHDDKKLFELLSLSGALAELTWPTILSKRQLFWEVFLEFDPIAVSQVNEKKIVAPGSPASSLLSEHRLRAIIENARQICKVADEFGSFHAFIWDFVNHKPIVSQFRYPRQVPVKSPKAEVISKELMRRGFRSVGPTVIYTFMQVAGLTNDHLISCFRFKECIANAEAVEEDGSLNSKVKKEKVNEEPSEAR 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02579 373 SUPERFAMILY DNA-glycosylase 158 344 IPR011257 GO:0003824|GO:0006281
Bva02g02579 373 MobiDBLite consensus disorder prediction 354 373 - -
Bva02g02579 373 MobiDBLite consensus disorder prediction 92 111 - -
Bva02g02579 373 Pfam Methyladenine glycosylase 165 339 IPR005019 GO:0006284|GO:0008725
Bva02g02579 373 MobiDBLite consensus disorder prediction 1 59 - -
Bva02g02579 373 MobiDBLite consensus disorder prediction 36 59 - -
Bva02g02579 373 Gene3D Hypothetical protein; domain 2 157 340 - -
Bva02g02579 373 MobiDBLite consensus disorder prediction 92 128 - -
Bva02g02579 373 MobiDBLite consensus disorder prediction 352 373 - -
Bva02g02579 373 PANTHER OS04G0501200 PROTEIN 1 371 - -
Bva02g02579 373 PANTHER DNA-3-METHYLADENINE GLYCOSYLASE I 1 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02579 Bva-Chr2 24151518 24155579 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02579 K01246 - gmx:100805836 459.144