Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02572 ATGACTTCCTCTCAgacagaaagagaagagatgcTTAAGCTCAGAGAAAACGAGCTCAAAGCTCTTGGGGAAAAACTCCTCAACACCCCATCTTCACCGGTTGATAAGCTTCTCGAATGTCTTAAAAAACTTGATGGTTTATTATCAATCATGTCACAAGAAGAGAAGTCAGATACCCTTTTACCTGCAATGAAGGCATTGATTTCCAGTAATCTTTTCAGGCACTCAGATGAGGAAGTTAAGATTTTGGTTACTTCTTGCATCACACAGATTACAAGAATAACTGCACCAGATCCCCCATTTAATGATGACAAAATGAAGGAAATTTTCCAGCTCATAGTAGctgcttttgaaaaattgtcTGATGAATCTGATCGCTGTTACGACATGGCTGTTTCAATACTTGATAATGTTTCAACAGTCCGGTCGTCTGTGATCATGCTTGACCTTGAGTGTAATGACTTGGTCATTCAGATGTTTGAGCATTTCCTAAGAATTATCAGGCTAAACCATTCAGGTGAAATATTTAGAAATGTAAAAACAATAATGAGCACAGTCTTGGAGGAAAGCGAAGATGTTTCCTCGGATCTTCTTGGGCCCCTACTCGACAGTTTGATAAAGGACAATCAAGCTGTTTCACCCCAGTCGTGGACATTGGCTGAGCAAGTCATTGCAGAATGCTCAGATAAGCTCAAGTCCTATGTCCATCAGGCTGTCCAGTCCAGAGGCAGACCTATAGATGACTATGCTGAGATGGTGGCTTCTATATGCCATCGTGAAGCTGAAACCATCCAGCATGAAAATTCCAATGCTTATAGGATGGAGCCGtacCGAGGGGTAATGATTGTAGTAGTAGATTGCAATGCAAGTGAGAACTCAATACAGGATCGCTTTATTGCATCTTTTTATTCTGGATGTATTAGCCCTAACTCTGGTTTCTGTATCCTGAGCAAAATGATCATATATTCAAAGGTTCAGGCAGATGAGAACAAGCTAGACATATGTAAAGATGCAGATGAGCAACCCTTATGTGTCCCTGAGGGGCTTAAACTTGATATGACTTGTGTGAGAGATGTTACCCAAGTTATGGACAGGACAGAGACAAATATAGAAAATGCCAGTTGTTCGGCTATGAATGctgaaaatgtgaaaaaggAAGTTtcaaaaagacaaaagcaaCAGCATTCTGATCTTGATAAACACTCCAAAAGTAACAACGCAAAACCCAGTCCAGAGTCTGTTAAGGAATCAAAATCAGAAACTGAACCCAATACAGTGCTAAAGAAAAGGGGCCGCAAGCCTAATTCTTTAAAGAATCCGGATGAAGGTTATAAGTATTTGATGTctagagaaaggaaaagtgcAAAACCAGCACAATCCATAAAGGTTCATAAGATGGTGCCTTCGGAAAACCTGGAAAAAAAATGTCGAGTTTCCATCCCTAAAACTGATGAGAATGCTGATGCTTCCCTTCCTGCAGTAGTAGAAGGTAGTAGTCTTGATCAAAGCCGTCCAAAAAGGGGCCggccaaagaaaagaaaaattgctgACAATCAGGATGCAGAACTACTTTCTCAATCCATGTCAAAAGATGGTCTCTTAAGCCCTCAGCTTGAGAAGACTTCTTTGGAACTTCCAGGTGCTAGAACAGAAAGGGATtctgaagaaataaaagataaagatgtGGAACCTCAACCAAGCACTAGGGCAATCAGGTCTGCTGCAAAGATTGGCAAGAAAACAACTGTGGCCCAGATGGAATCTAAAACGTTTTCTGAAGATAAGGAGCAACCGGAGTCAGCTTTGAATATTGAtgcagaaaatataaaagaggGAAAAGCTTTGGTTCAAACAAATGTTAAGAAAAGGAGGAGGCATAATGCTACTTTTACAAAAGATCTCAATGAATCACCTGTCAGTAAGGAGTTGATTGTAGAGTCTGCCACTAAATCATCACACAGACCTGCAGAAACCCCTCAAACAAGACCAAAGAGAAAGTGCACTGCTGCATGGGATGAGgACCCATTGGTTGGTAGGAGGATCAAGGTCTGGTGGCCAATCGACAAGAGGTTTTATACAGGTcttgttgtttcttttgaccgtcaaaagaagaaacacaagACACTGTATGATGATGGAGATATGGAAGTATTAAACTTAGAAAAGGAATGCTGGCACCTAATTGAGGATGATGATTCACCGGATGCTGAACAAGGAACTGATCTTGAAAAACTTGAGGTGGCATCAGATACgaaagggaagtCAAAGTCCGAGCAAGCCAAGCGCAGAAAGGCCAAATTGAGCTTAAGGAGTGATGATGGGCAAGACTCTGCTGGGAATTCCAAGTCAGCCAAAGTTGCAAATGTGAATCACAGAAAGAGGAGTAAAGTGTCGGCTAGCGGCTCGAAACTGAAAAGCTCAGAAGATGAGTCGGGGCCTGCTTCCATCTA 2450 0.3833 MTSSQTEREEMLKLRENELKALGEKLLNTPSSPVDKLLECLKKLDGLLSIMSQEEKSDTLLPAMKALISSNLFRHSDEEVKILVTSCITQITRITAPDPPFNDDKMKEIFQLIVAAFEKLSDESDRCYDMAVSILDNVSTVRSSVIMLDLECNDLVIQMFEHFLRIIRLNHSGEIFRNVKTIMSTVLEESEDVSSDLLGPLLDSLIKDNQAVSPQSWTLAEQVIAECSDKLKSYVHQAVQSRGRPIDDYAEMVASICHREAETIQHENSNAYRMEPVQADENKLDICKDADEQPLCVPEGLKLDMTCVRDVTQVMDRTETNIENASCSAMNAENVKKEVSKRQKQQHSDLDKHSKSNNAKPSPESVKESKSETEPNTVLKKRGRKPNSLKNPDEGYKYLMSRERKSAKPAQSIKVHKMVPSENLEKKCRVSIPKTDENADASLPAVVEGSSLDQSRPKRGRPKKRKIADNQDAELLSQSMSKDGLLSPQLEKTSLELPGARTERDSEEIKDKDVEPQPSTRAIRSAAKIGKKTTVAQMESKTFSEDKEQPESALNIDAENIKEGKALVQTNVKKRRRHNATFTKDLNESPVSKELIVESATKSSHRPAETPQTRPKRKCTAAWDEDPLVGRRIKVWWPIDKRFYTGLVVSFDRQKKKHKTLYDDGDMEVLNLEKECWHLIEDDDSPDAEQGTDLEKLEVASDTKGKSKSEQAKRRKAKLSLRSDDGQDSAGNSKSAKVANVNHRKRSKVSASGSKLKSSEDESGPASI 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02572 768 MobiDBLite consensus disorder prediction 434 551 - -
Bva02g02572 768 Gene3D - 626 675 - -
Bva02g02572 768 MobiDBLite consensus disorder prediction 752 768 - -
Bva02g02572 768 Coils Coil 315 335 - -
Bva02g02572 768 MobiDBLite consensus disorder prediction 683 768 - -
Bva02g02572 768 PANTHER TRANSCRIPTIONAL REGULATOR 15 757 - -
Bva02g02572 768 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 15 757 IPR039776 GO:0007064
Bva02g02572 768 MobiDBLite consensus disorder prediction 683 723 - -
Bva02g02572 768 MobiDBLite consensus disorder prediction 497 518 - -
Bva02g02572 768 MobiDBLite consensus disorder prediction 365 394 - -
Bva02g02572 768 MobiDBLite consensus disorder prediction 325 394 - -
Bva02g02572 768 MobiDBLite consensus disorder prediction 472 488 - -
Bva02g02572 768 MobiDBLite consensus disorder prediction 598 619 - -
Bva02g02572 768 SUPERFAMILY Tudor/PWWP/MBT 627 667 - -
Bva02g02572 768 Pfam Sister chromatid cohesion protein PDS5 protein 35 237 - -
Bva02g02572 768 MobiDBLite consensus disorder prediction 335 358 - -
Bva02g02572 768 SUPERFAMILY ARM repeat 35 237 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02572 Bva-Chr2 24113851 24121947 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02572 - - vra:106773633 476.863