Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02540 ATGGATTGGTTCTCGTGGCTTTCCAAAACTGGCCTTGAGCCCTCCCTAGTTTATGAGTATGGCCTGGCTTTTGCTCACAATGAGCTCGAAGAAGAAGACATAATTTACTTCAACCATGAATTTCTGCAGAGCATGGGCATCTCCATAGCTAAGCACAGGCTTGAAATTCTCAAGCTTGCAAGGAAGGAGAGAGGAAAAAGACCACGTCCTGTGGCAAAGCTCATCGTGGCAATCAAGAGGACAAAGAGGAGCTTAGCTAATTACATTCGGACATTCTGTCGCCGAGAAGAATCAGCTCTTGTGGTTGTGCCAACGAGGCCTAGTGGTTACGGGACAAGATGGAAAGATTCTTTGTTGAAGAGGAACAAAAAGATGATAGCTAAGCAAGAGAGGCTCTTGCTCACAAATGGAAGTTCTACAGTGGTGCCTGGTCTGCCGGGTCTTGATGGTTTTTCAAGTCCTATGGTGTACAATGTTCGGAAGGAGGAAATGGTTGAAGGAGATGATGATGGGTATTGGTCAGCTGCTGTTGAAGAGATCAGGTGGGATACCATGTTCCAGGACTTAAAACCAAACTG 578 0.4602 MDWFSWLSKTGLEPSLVYEYGLAFAHNELEEEDIIYFNHEFLQSMGISIAKHRLEILKLARKERGKRPRPVAKLIVAIKRTKRSLANYIRTFCRREESALVVVPTRPSGYGTRWKDSLLKRNKKMIAKQERLLLTNGSSTVVPGLPGLDGFSSPMVYNVRKEEMVEGDDDGYWSAAVEEIRWDTMFQDLKPN 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02540 192 SUPERFAMILY SAM/Pointed domain 5 64 IPR013761 -
Bva02g02540 192 CDD SAM_superfamily 2 62 - -
Bva02g02540 192 Gene3D - 1 68 IPR013761 -
Bva02g02540 192 Pfam SAM domain (Sterile alpha motif) 6 58 IPR001660 GO:0005515
Bva02g02540 192 PANTHER OSJNBA0033G05.11 PROTEIN 1 192 - -
Bva02g02540 192 PANTHER OSJNBA0033G05.11 PROTEIN 1 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02540 Bva-Chr2 23972848 23973901 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02540 - - zju:107407934 285.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02339 08 15139131 15140124 Bva02g02540 02 23972848 23973901 BWGD
Bva02g02540 02 23972848 23973901 Bva02g02540 02 23972848 23973901 ECH