Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02526 ATGGCCCCAAGATCgggaaaagggaaaacaaaaaaagctaagaaaaaagaagagaaagTTGTGCCTTCCCTTGTTGATATAACCGTCCTTATTCCATATGATTCCGAAATTGTGCTCAAGGGCATCTCTACTGATAAGATAGTTGACGTGAGAAGGCTATTGGCCGTGAATGTGCAAACTTGCCATTTTACAAACTATTCTCTTCTTCATGAGgTTAAGGGGCATTGGTTAAATGACGGATCAGTACAAGTGGTTAGTCTAAAGCCTTGTGTTGTCAGAATGGTTCAGGAGGATTACACAGAAGAAGCCCAAGCAATTGCGCACGTGCGGCGACTTTTGGACATAGTGGCTTGTACTACGAGATTTGCGAAGCCGAGATGGCACTTATCGAGCCCAGATTCCAAAGCTAGGAAGAATAGTAAGGCCCAATATCAACCCAAGAGTAATCTGAGCCCACCCACAACGCCCAATGGGGAAATCCGGGTCGGGTCGACTTTGTCGGAACCGCCTGTTTCGCCGATCTCGGATACCGCCGGCACGGTGGCCATTCATCCGACGCCGAAGCTGTCAGACTTCTACGAGTTCTTCTCGTTCTCTCATCAGTCTCCTCCGATTCTGCATTTAAAGCGATGTGACCTGAAGAACGAAGAGAATAGCCGCAAAGGAGACTACTTTCGGCTTCAGATTAAAATCTGCAACGGAAAGCTAATAGAAGTGGTTGCATCCGAAAAAGGATTTTATACTGTAGGAAAGCAGTCTCTTCTTAGCCACTCTTTAGTTGATCTTCTTCAACAACTCAGCCGAGGTTTTGCTAAcGCATATGGATCCTTGATGAAAGCATTTTTGGAACACAATAAGtttGGTAATCTTCCATATGGATTCCGGGCTAATACATGGCTTGTCCCTCCATCTGTTGCCGAGTCTCCTTCAAATTTTCCTGCCCTACCTAATGAGGATGAAAATTGGGGTGGTAATGGTGGTGGTCAGGGAAGAAATGGTGAATATGATCTCAGACCGTGGGCTACAGAGTTTGCAAGACTGGCTTCTCTTCCTTGCAAAACCGAGGAGGAGAGGGTGGTCAGAGACAGAAAAGCTTTTCTACTTCACGGTCAATTTGTTGATACCTCAATATTTAAGGCTACAGCAGCTATCCGGCATGTCATAGAGTCCAAGTTGAATGGGAACAATAAATTGAATTGGTGTCCGGGTTCAATCCTGTATGTAGATAGAGTCGGAGACTTGTCCATCGAAGTCAAGCGTGATATAagtgatgataaaaaaaaacatgattcaaaattttctggcAACGAATACACTCTGGATAGGAAGGTTGCTCAAAAGAATTTACTCAAAGGGTTGACTGCAGATGAAAGTGTAATTGTTTATGATACTTCCTCCTTGGGCGTTGTTGTTGTAAGCCACTGTGGATACACTGCAACAGTAAGGGTTGTGGGTAATGTAAACGTGAGGAAGCCTGATTCTCAAGATTTTGAAATAGATGATCAGCCAGATGGAGGGGCTAATGCTATCAACATCAATAGTCTGAGGCTACTGCTTCATAAGTTTGGAGCTGATCCATCAGAAATGAGTTCATCAATACCCAATTCAGATGAATTAGACTCTTCCAGATGTCTTGTTCGAAAAGTGGTTAAAGAAAGTTTGACAGAGATCAATGAGGAGCCAATTGTTTCAGAAAGGTCTATCCGATGGGAACTCTGTTCTTGTTGGGTGCAACATCTgcaaaaacaagaaacttCAACAGATATCATatccaaaaacaaacaagatgGTAATGAAGTTGAACAAGCTGTTAATGGTCTTGGAAAGCAGTTCAAATTGTTGAAGAGGAGGGAAAAGAAACCAAGTGTTCTAGATTATCCAGAATATAGAGAGCAAAGTGACTCTGGACCTGGAAATGTGAATGTGGGAAACGATGAAGTTGAagcaaaaaaggaagaaatcaaAAGCTCCACTGAGTTGGAAAAATTGCTCTCTAAAGAAGCATTTTTGCGTCTGAAAGAATCTGGAACTGGTCTTCATCTAAAGACAGTAGATGAACTTCTTGACATGGTCCACAAATACTATGATGAAATTGCCTTGCCAAAGCTGGTTACGGACTTTGCATCACTTGAACTTTCTCCAGTTGATGGCCGTGCACTGACCGACTTCATGCATTTAAGAGGACTGCAGATGCGATCTTTGGGTAAAGTTGTTAAACTTGCAGAGAATCTTCCACACATCCAATCTCTTTGTATTCACGAGATGGTTACTCGAGCTTTCAAGCATGTCCTTAAATCATTGATTGCCTCAGTTGAGAATGTAGCAGACTTATCTGCAGTGATTGCATCAACAATGAATTTCTTACTTGGAAGCTGTCAGATGGGAACTATTGACCAAGATTTGAGTGATGACCATCAGCTCAGATTACAGTGGttaagagtatttttatataaaagatttgGTTGGATGCTAAATGATGAGTTTCAACATTTGAGGAAGTTATCGGTTCTCAGAGGGCTTTGTCATAAGGTTGGTCTGGAATTGTTGCCAAGAGAGTATGACATGGATTCCCCTAATCCCTTTGGGAAATATGATATTATCAGTCTGGTTCCTGTATGCAAGCATGTAGAGTGTTCTTCAGCAGATGGACGTAATTTATTGGAAGCATCCAAGAGTGCTCTTGATAAAGGAAAGCTCGAGGATGCTGTGAATTACGGAACAAAGGCATTGGCAAAGATGATGGCTGTTTGTGGTCCCTATCATCGAACTACTGCAAGTGCTTACAGTCTTCTAGCTGTGGTTCTCTACCACACCGGAGATTTTAATCAGGCAACAATTTATCAGCAGAAGGCCTTAGATATAAATGAAAGGGAGCTTGGACTTGACCATCCAGATACAATGAAAAGCTATGGGGATCTATCTGTCTTTTATTATCGTCTCCAGCACATTGAGCTTGCTCTGAAATATGTAAACCGTGCTCTgttccttcttcatttttcatgCGGACTGTCTCATCCAAACACAGCTGcaacatatataaatgtgGCTATAATGGAAGAGGGCATGGGAAATGTTCATGTGGCACTTAGATACCTACATGAAGCTCTTAAGTGCAACAAAAGATTGTTAGGAGCAGATCATATACAGaCTGCTGCAAGCTATCATGCCATAGCCATAGCTCTTTCATTGATGGAAGCATATTCTTTGAGCGTGCAACATGAGCAAACTACATTTAAGATACTTCAAGCAAAACTTGGATCAGAAGATCTCCGTACACAGGATGCCGCAGCGTGGCTTGAATATTTTGAATCAAAAGCAATAGAACAGCAAGAAGCAGCCAGACATGGGACTCCAAAGCCAGATGCATCCATTGCAAGTAAAGGTCACCTTAGTGTGTCAGATCTCCTGGATTTTATAAGTCCTGAGCATGATTCAAAAGGAAATGATGCTCAGAGGAAACAACGGCGTGCAAAGATACTTTCAATGAAtggaaaaaatattcaagaacATGATGGTACAACAGCTGATGATGAAATTATCTTTGATGGATCAAAAGATACTATAAGCATGGTAGAAGGTAatgtagaagaaagaaatggtaCACATCATTCTGAAGAACTGAGAAAAAGTGATGATTTCATTAGGTATGGACAAGTGACAAGAAGTGAAGTTGTTGAAGAAACCTCATCTGATGAAGGGTGGCAAGAAGCAAATTCGAAAGGACGATCTGGAAACACTGCTAACCGCAAGCTTGGCCGGAGACGACCTCTTGTTGCAAAGCTGAAGATTAAGAGTTCAGAGAATTCCCTTGTAAGAGAAAGCAGCTGTAGGCAGGACATTACTTCACCACCCCAAAGAGGATCTTCCAAATTGACTTCAACCATGTTATCTCTACCTAGGCAATCAAAAGCTCCAAGTTTAACTTCAAAAGAGGATTCTGTTAATATTCTAACAAAAGCTTCTCTTTCTAAAAGTTCTCCCACTTCAGCAACTCTCAGTTCTTTGGCTTCAGAATCTGTATCTTACAAAGAAGTGGCTCTGGCACCACCAGGTACAGTTTTAAAGCCCTTGTTGGAGAAAGTTGAAGTGGCTAAGGCTGGAAATGAGATGTGCAACAATCCAACTGTGGTACCAATAACTGTAGAAAGGTGCCAAAACCCCATGGTTGAAGCAGTCTCCGGACACGATGAAAGAGAGGAAACTCATGAAAATGGTACTCAACCAGAAAATTCTGCATCTGAACATGAGGAGATTTCTGCCCCTCCTGATCAAGAAAGACCTTCTGAAACAAATGGTAGCAAGCTTTCAGCCACAGCCGAGCCATTCAATCCTAGAGCAATGTCTCCTGTCACAAGCATTTATGATTCAAATGTTAGTCAAGGAATACCTATTGAGCCTGTGCTTCCTCCAGCTGCTGCTAGGGTTCCGGAAAGAAGTGGATTTGACTCTCCAAAATTCATGAATCCTCGTGCACCTGAGTTTGTTCCCAGAAGAGCTTCACAAACAGAAATCAACGAGGCTGATTCAAAAGTTTCTAGTGGGATTAATTCCCCTATTGAAACAAGCGTGGCAGAAGACAAGAAGCTAGATCAAAATTTCGGTGAAGTAAAGGATAGCTCCCGGAAAAAGAGCATTTCTGAATCTGAGAAGTCAGAGCTAGCAAGGCAGATATTGCTTAGCTTTCTTGTGAAATCAGTTCAGCAAAACATTGACTCTACAGATGAATCTGAAGGAAAACATGGGAATTTGGAAAATTCTTCTGATGCAGTAGCTAAAGATAGTgctattataaaaattctgtTTGGGagtgaagaaaacaataaGATGGTTGCTCATTCCAGTGGTAgtatagagaaagaaaaaatagttacGACTACGAAAAATTATGGAGACGAAGGATTTATAGTTGTCAAAAAGAGGAGAAGAGGCAAGCAGAAATTCACAAATGGGGAAACAGGGTTGCACAACCAACAGTCAATCGTTGCTTCAATACGTTA 4997 0.3986 MAPRSGKGKTKKAKKKEEKVVPSLVDITVLIPYDSEIVLKGISTDKIVDVRRLLAVNVQTCHFTNYSLLHEVKGHWLNDGSVQVVSLKPCVVRMVQEDYTEEAQAIAHVRRLLDIVACTTRFAKPRWHLSSPDSKARKNSKAQYQPKSNLSPPTTPNGEIRVGSTLSEPPVSPISDTAGTVAIHPTPKLSDFYEFFSFSHQSPPILHLKRCDLKNEENSRKGDYFRLQIKICNGKLIEVVASEKGFYTVGKQSLLSHSLVDLLQQLSRGFANAYGSLMKAFLEHNKFGNLPYGFRANTWLVPPSVAESPSNFPALPNEDENWGGNGGGQGRNGEYDLRPWATEFARLASLPCKTEEERVVRDRKAFLLHGQFVDTSIFKATAAIRHVIESKLNGNNKLNWCPGSILYVDRVGDLSIEVKRDISDDKKKHDSKFSGNEYTLDRKVAQKNLLKGLTADESVIVYDTSSLGVVVVSHCGYTATVRVVGNVNVRKPDSQDFEIDDQPDGGANAININSLRLLLHKFGADPSEMSSSIPNSDELDSSRCLVRKVVKESLTEINEEPIVSERSIRWELCSCWVQHLQKQETSTDIISKNKQDGNEVEQAVNGLGKQFKLLKRREKKPSVLDYPEYREQSDSGPGNVNVGNDEVEAKKEEIKSSTELEKLLSKEAFLRLKESGTGLHLKTVDELLDMVHKYYDEIALPKLVTDFASLELSPVDGRALTDFMHLRGLQMRSLGKVVKLAENLPHIQSLCIHEMVTRAFKHVLKSLIASVENVADLSAVIASTMNFLLGSCQMGTIDQDLSDDHQLRLQWLRVFLYKRFGWMLNDEFQHLRKLSVLRGLCHKVGLELLPREYDMDSPNPFGKYDIISLVPVCKHVECSSADGRNLLEASKSALDKGKLEDAVNYGTKALAKMMAVCGPYHRTTASAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLSVFYYRLQHIELALKYVNRALFLLHFSCGLSHPNTAATYINVAIMEEGMGNVHVALRYLHEALKCNKRLLGADHIQTAASYHAIAIALSLMEAYSLSVQHEQTTFKILQAKLGSEDLRTQDAAAWLEYFESKAIEQQEAARHGTPKPDASIASKGHLSVSDLLDFISPEHDSKGNDAQRKQRRAKILSMNGKNIQEHDGTTADDEIIFDGSKDTISMVEGNVEERNGTHHSEELRKSDDFIRYGQVTRSEVVEETSSDEGWQEANSKGRSGNTANRKLGRRRPLVAKLKIKSSENSLVRESSCRQDITSPPQRGSSKLTSTMLSLPRQSKAPSLTSKEDSVNILTKASLSKSSPTSATLSSLASESVSYKEVALAPPGTVLKPLLEKVEVAKAGNEMCNNPTVVPITVERCQNPMVEAVSGHDEREETHENGTQPENSASEHEEISAPPDQERPSETNGSKLSATAEPFNPRAMSPVTSIYDSNVSQGIPIEPVLPPAAARVPERSGFDSPKFMNPRAPEFVPRRASQTEINEADSKVSSGINSPIETSVAEDKKLDQNFGEVKDSSRKKSISESEKSELARQILLSFLVKSVQQNIDSTDESEGKHGNLENSSDAVAKDSAIIKILFGSEENNKMVAHSSGSIEKEKIVTTTKNYGDEGFIVVKKRRRGKQKFTNGETGLHNQQSIVASIR 1665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02526 1665 MobiDBLite consensus disorder prediction 128 171 - -
Bva02g02526 1665 SMART tpr_5 967 1000 IPR019734 GO:0005515
Bva02g02526 1665 SMART tpr_5 1009 1042 IPR019734 GO:0005515
Bva02g02526 1665 SMART tpr_5 925 958 IPR019734 GO:0005515
Bva02g02526 1665 MobiDBLite consensus disorder prediction 1424 1438 - -
Bva02g02526 1665 Pfam Tetratricopeptide repeat 924 994 - -
Bva02g02526 1665 Pfam Tetratricopeptide repeat 1008 1082 - -
Bva02g02526 1665 MobiDBLite consensus disorder prediction 1523 1548 - -
Bva02g02526 1665 ProSiteProfiles TPR repeat profile. 925 958 IPR019734 GO:0005515
Bva02g02526 1665 SUPERFAMILY Hypothetical protein c14orf129, hspc210 216 284 IPR023231 -
Bva02g02526 1665 MobiDBLite consensus disorder prediction 1505 1520 - -
Bva02g02526 1665 MobiDBLite consensus disorder prediction 1231 1246 - -
Bva02g02526 1665 MobiDBLite consensus disorder prediction 1268 1313 - -
Bva02g02526 1665 CDD CLU-central 714 855 IPR033646 -
Bva02g02526 1665 MobiDBLite consensus disorder prediction 1222 1313 - -
Bva02g02526 1665 Gene3D Tetratricopeptide repeat domain 881 1127 IPR011990 GO:0005515
Bva02g02526 1665 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 1 1662 IPR027523 GO:0006996
Bva02g02526 1665 MobiDBLite consensus disorder prediction 1475 1548 - -
Bva02g02526 1665 SUPERFAMILY TPR-like 962 1080 IPR011990 GO:0005515
Bva02g02526 1665 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 1662 - -
Bva02g02526 1665 MobiDBLite consensus disorder prediction 1392 1451 - -
Bva02g02526 1665 MobiDBLite consensus disorder prediction 136 171 - -
Bva02g02526 1665 Pfam Mitochondrial function, CLU-N-term 44 116 IPR028275 -
Bva02g02526 1665 Pfam Translation initiation factor eIF3 subunit 135 712 854 IPR033646 -
Bva02g02526 1665 ProSiteProfiles Clueless (Clu) domain profile. 318 591 IPR025697 -
Bva02g02526 1665 SUPERFAMILY TPR-like 886 994 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02526 Bva-Chr2 23894915 23904359 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02526 K03255 - gmx:100784276 2248.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02526 02 23894915 23904359 Bva02g02526 02 23894915 23904359 ECH