Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02522 ATGGAGATTGATACTCTTGTTACCCCTATCAATAACAACGAGCAACCTGATTCAGAAGCACAAGCTAATAAGCGTAGGAGGAAGAAGTCTATAGTCTGGGAACATTTCACAGTGGAAACTGTTGCAGCTGGATGTTCCAGGGCTTACTGTAAACAATGCAAAAAGTCATTTGCTTATATAACTGGTTCAAAGCTGGCGGGCACGAGTCATCTGAAGCGACATATTGCCTTAGGAATCTGTCCAGTAAGTCGCCAGAAAAATCAGCAAAACCCACATTCCAGAACCGCCGGTTCTGGAAATATTGCTGATCCACCAAAGAAACGTGCTAGAGCAACTGCTACTTTAGCTGGTATCCCATTTGATCAGGACCGATGCAACCATGAGATAACTAAAATGATTATTGTGCATGATTATCCACTTCATATTGTAGAACACCAGggtttcattgattttgtGCGGACTCTTCAACCTCAGttcaatttaataagttttgaTGCAGTTCAAGGGGATTGTGTCAATATGTACCTGAGAGAGAAGCAAAATCTGTTGAATCTTATAAATGGGATTCCTGGGCGAGTCAACCTGACTGTGGACTTCTGGACTTCAAACCAGACAGTGAGCTATGTTTTTCTTCGTGGGCATTTCATTGATGGTGATTGGAATTTACATCGTCCCATTCTTAATGTTATTATGGTAACATTTCCTGATTCTGATGATTGCTTGAATCAATCTATTCTGACCTGCCTGGCTGATTGGAATTTGGAGGGCCGACTATTTACTCTTGCACTTGATCAATCCTTCTCAAATGAGACTGTGATGGGAAATCTTAGAGGCCTCCTCTCTGTTAAAAACCCTGTGACCCTTAATGGTCAATTGTTAAGCAGAAATTGTTATGCTCGTGTCCTTAGTCGCCTTGCCCTAGATGTGATGTGGGCAATGAAAGAAACCATCAATAAAGTTCGTGATATTGTGAAGTATGTGAAAACTTCAGAATCTCATGAAGAGAAGTTCCTTGAGCTGAAGCAACAACTTCGAGTCCCTAGTTTGAAGGACCTTTTGATTGATGATCGATCTAAGTGGGACACAACATACCATATGCTTGTTGCTGCCTGTGAATTAAAGGAagtctttgttttctttgatacATCTGATCCTGATTTCAGAATGACTGTGTCAATGGCTGAGTGGAAGGAGGTAGAAACTGTGTGTGTATACTTAAAGTTTTTGTTTGATGCGGCTAACATTTTAACTGCGCAGCCATACCCCACAGcaaacatttttttccctGAAGTGGCGAAACTACTGATGGAGTTGACCCATGCGGCCATGAGCCAGGATCCCTTAGtcagaaatttaattaagccTTTGCAAGAGAAGTTTGATCAATATTGGAGAGAAAGTTGCCTGATCTTGGCAGCTGCTGCGGCCATGGACCCAAGGTATAAAATGAATCACGTGGAGCGCACTTTCACCGATGTGTTTGGTGAGAATGCTGAGCCATGGATACGGATTGTTGAGGATGGTCTTCGTGAACTTTTCcttgattatattttacaagtgCTTCCTTGGACAGCACCTAATGTGGACGAAGGGAACGAGGGTATGATCAAGACAGAGACATCTCAAGAAGGGTCTCTTGATGCGTCTCTTTTTTCTGTAGATGGGTTTTCGGACTTTGATGTTTATATTTCTGAGTTTACGAGTAACCAGCAAACCAAGTCAGAATTGGATCAGTATTTGGAAGAGTCTGAGGTGCCTGATGAACTAGAATTTGACATTCTGAGCTGGTGGAGACTAAACGGAGTAAAGTACCCAGCTTTGTCTAGAATGGCATCTGATATTTTGTCTTTACCAGTATCTAGCCTCTCTGCCGATTCCGTTTTCGACACTGATATTAGGAAAATGGATAGCTACCGGAGCTCACTAAGCTCTCTGACCCTTGAGGCTCTTGTATGTACTAAGGACTGGTTGCAGTGTGAATCATTATCCCCCATAGATTTTTCAGATGCTTTAGTAAAAATGGAATTTTa 2030 0.403 MEIDTLVTPINNNEQPDSEAQANKRRRKKSIVWEHFTVETVAAGCSRAYCKQCKKSFAYITGSKLAGTSHLKRHIALGICPVSRQKNQQNPHSRTAGSGNIADPPKKRARATATLAGIPFDQDRCNHEITKMIIVHDYPLHIVEHQGFIDFVRTLQPQFNLISFDAVQGDCVNMYLREKQNLLNLINGIPGRVNLTVDFWTSNQTVSYVFLRGHFIDGDWNLHRPILNVIMVTFPDSDDCLNQSILTCLADWNLEGRLFTLALDQSFSNETVMGNLRGLLSVKNPVTLNGQLLSRNCYARVLSRLALDVMWAMKETINKVRDIVKYVKTSESHEEKFLELKQQLRVPSLKDLLIDDRSKWDTTYHMLVAACELKEVFVFFDTSDPDFRMTVSMAEWKEVETVCVYLKFLFDAANILTAQPYPTANIFFPEVAKLLMELTHAAMSQDPLVRNLIKPLQEKFDQYWRESCLILAAAAAMDPRYKMNHVERTFTDVFGENAEPWIRIVEDGLRELFLDYILQVLPWTAPNVDEGNEGMIKTETSQEGSLDASLFSVDGFSDFDVYISEFTSNQQTKSELDQYLEESEVPDELEFDILSWWRLNGVKYPALSRMASDILSLPVSSLSADSVFDTDIRKMDSYRSSLSSLTLEALVCTKDWLQCESLSPIDFSDALVKMEF 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02522 676 Coils Coil 673 676 - -
Bva02g02522 676 MobiDBLite consensus disorder prediction 82 97 - -
Bva02g02522 676 ProSiteProfiles Zinc finger BED-type profile. 27 87 IPR003656 GO:0003677
Bva02g02522 676 SUPERFAMILY beta-beta-alpha zinc fingers 30 77 IPR036236 -
Bva02g02522 676 MobiDBLite consensus disorder prediction 1 18 - -
Bva02g02522 676 SUPERFAMILY Ribonuclease H-like 187 658 IPR012337 -
Bva02g02522 676 SMART bed5 27 83 - -
Bva02g02522 676 MobiDBLite consensus disorder prediction 82 108 - -
Bva02g02522 676 MobiDBLite consensus disorder prediction 1 27 - -
Bva02g02522 676 Pfam Domain of unknown function (DUF4413) 419 516 IPR025525 GO:0003677
Bva02g02522 676 Pfam hAT family C-terminal dimerisation region 575 657 IPR008906 GO:0046983
Bva02g02522 676 PANTHER ZINC FINGER BED DOMAIN-CONTAINING PROTEIN DAYSLEEPER-LIKE ISOFORM X1 14 666 - -
Bva02g02522 676 PANTHER BED FINGER-RELATED 14 666 IPR045259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02522 Bva-Chr2 23880712 23884160 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02522 - - gmx:106795554 949.118
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02324 08 15042150 15045750 Bva02g02522 02 23880712 23884160 BWGD
Bva02g02522 02 23880712 23884160 Bva02g02522 02 23880712 23884160 ECH