Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02517 ATGTCTGCTGCAGTGTGCGGAAGTAAGCGATCTTTCTTCGAGGAACTTCCTTCATCACCCTCTGTGTCGAAGAGGCTTCGTTGCTCATCCTCCACTTCTCCAATTTGTTTCTCGGCACCAGGTCTTATTGATCAGCTACGGGCTGTGTTTCCTCATATGGAAGCGCAGATCCTTGAGAAAGCACTCCAAGAATGTGGCAATGATCTAGATGCTGCCATCAAGAGCCTACATGGACTTTGCTTAGGATCTGCAGATGAAAATTCTGGTAGTGCTGAAGAATCAGAAGCTAATGTGGAGACAGGTACTTGTAAGAATAATGGGGATGTTTCTGCTTCTGAGAATTGGTCAGCTGTGAACAACCTTCCTTCAGATGGAGCAGAATGGGTTGATTTGTTTGTGAAGGAAATGATGAGTGCTACTAACATTGATGATGCCAGAGCCCGTGCTGCTAGAATGCTGGAGGTTTTGGAGAAATCAATCAGTGCACGTGCAAGTGCTGAGGCAACAGATGTTATTCTAAAGGAAAATATGATACTGAAGGAGCAAATTGAAGGGTTGATGCGGGAGAACACTATTCTTAAACGTGCTGTGACCATCCAGCATGAACGTCAGAAAGAGTATGAGGACAAGAACCAAGAGTTGCAGCATTTGAAGCAGTTAGTATCTCAATATCAGGAGCAATTGAGAACTCTTGAGGCGAATAACTATGCGTTGGCAATGCATTTGAAGCAGGCTCAACAGTGCAATACTTTTCCTGGGCGTTCTCCGCCTGATGTCTTCTA 782 0.4488 MSAAVCGSKRSFFEELPSSPSVSKRLRCSSSTSPICFSAPGLIDQLRAVFPHMEAQILEKALQECGNDLDAAIKSLHGLCLGSADENSGSAEESEANVETGTCKNNGDVSASENWSAVNNLPSDGAEWVDLFVKEMMSATNIDDARARAARMLEVLEKSISARASAEATDVILKENMILKEQIEGLMRENTILKRAVTIQHERQKEYEDKNQELQHLKQLVSQYQEQLRTLEANNYALAMHLKQAQQCNTFPGRSPPDVF 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02517 260 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 260 - -
Bva02g02517 260 Coils Coil 176 196 - -
Bva02g02517 260 Coils Coil 207 234 - -
Bva02g02517 260 Gene3D - 42 82 - -
Bva02g02517 260 CDD CUE 42 76 - -
Bva02g02517 260 Pfam CUE domain 43 75 IPR003892 GO:0043130
Bva02g02517 260 ProSiteProfiles CUE domain profile. 38 84 IPR003892 GO:0043130
Bva02g02517 260 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 260 - -
Bva02g02517 260 SUPERFAMILY UBA-like 42 83 IPR009060 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02517 Bva-Chr2 23860162 23862628 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02517 - - zju:107407473 369.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02321 08 15019667 15022685 Bva02g02517 02 23860162 23862628 BWGD
Bva02g02517 02 23860162 23862628 Bva02g02517 02 23860162 23862628 ECH