Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02476 ATGATGACAGAGGAAGTGAAGAAATCTCTTCTTACGGCTTTCACTCCTAATGGCAACTACCTGGCAATCATGTCCTCTAATGGCACTGCCAAAATTTGGAACACAAAGAGTGGAGATTTATTAGCAGAGTGGAAGCCGTCGGATGGAGATTctgatatttattattcttgtatGGCATGTAGTTTTGTTAGAAAAAAGCGTAGAAAAGAACAGGATACTTGCATATTAGCTCTTGGCGATGTTGATGGGAACATTTTGGCTGTTGATGTTTCTGCTAGTGAGAAGAAATGGACAGCTAGCTATAGTAGTGGAGTTGCAGGGCTTTCATTTGCAAACAAAGGACGTGTTCTTCGTATTGTTGGACTTAATGGAATAGCATCTGAATTTGACGCAAAAACTGGAGAGCTTCTAAAGGAGTTCAAAACCTCCAAAAAGCCCGTCTCTTATCTGGCTTTCTCAGATGATGAGAAATATGTAGCTATAGTTGGCCCTAAACTGCGAGTTATAAGCTGGGAAAACGGAAAAGAGGTTCTGAAGTCCCCTGAACATTCGggTGATGTACAGTTTGTTTCTATATCCAATGATGCCAAAGCTTTAGCTACATCAGAATTTGGGGGTAAACATATTCAAGTTTGGAGTTGTGATGTGAACTCTGGAACCATAAATAGTGGTCCTACTCTTCCCATAAGGCATCCTCCAATAATATTAGAGTGCCATCATGGTTTCAATGAAGATAATTTAACTGTTTTAGCAGTTTTGGGTTCGGGTGCAGCTTATGTCTGGAACTTGAAGACCTCCTCTGAAGAGGTGGCAAAGCGAACAAAAATTACAGTTACGACAAAGAAAGTTGCAACTGACCAGCAAAACAGTAAAGTTTCAAAGAAGAATGGTACTTCCATCATTGCATCCAGATTACAACCTTCAGCAGAGAAACAGACAGCAGCCCTTGTTACTTATGGGTCTATAAATCATCCACAGTTTAGTATTTTAGATATAAGCAATTCAGGAGAGGATATCATCTTAAATGCTGCTGATGGAACCACAACTGCTCAAGGGCATGAATCTGTAGAagGCCTCCCTGACTTGGAACTCGAAGCAGCAGTGCCAACTGAAAGCAAAAAAGCAAGGAAGAGACAAGCATCATCTGAACCTGATCTTCCAACCACAGCAGACAAGATGGATTTTGGTCATGGTGAGGTTGCAGATGCGGTCCTTCTTGATAATGAGCCAACAATGGGCGAGAAACTTGCTAGTCTCACTTTGCTAGATGAGCATAAAGCGAAGAGTGATAAGGAGCAAGAATCTTCTATTCTAGCAAAGCCTCCAAGTGCAGACTCCGTACATGTGTTGCTGAGGCAAGCATTACATGCTGATGATCGCACCCTCCTTCTAGATTGCTTGTACACGCAGGATGAGAAGGTTATCACTAAGTCAATTTCGCAGTTAAACCCATCCAATGTCCTCAAACTTCTAAACTGTCTCATATCCGTCATTGAGTCCAGgGGTGCAATTTTGGCATGTGCTCTTCCATGGCTGAAGTGTCTACTTCTACAGCATGCAAGTGGAATAATGTCACAGGAATCTTCATTACGAGCTTTGAACTCTTTGTATCAGTTGATTGAGTCAAGAGTCTCCACTTTCAAATCTGCCATTCAACTATCAAGTTGCTTAGACATCCTTTACGCAGGGGTGATTGACGAAGAGGCAGATGAAGGTCAAACAGTGCCGGTTATCTACGAGGACAAAGATGATAGCGAAGAAGAATCCGAGGACGCTATGGAAACTGACCAAGAAGAGCAGCAATCAGACCAAGAATTTGATGGTGATAGTGACATTGAAGGCAGCGACGATGAGATGAGCGAGTG 1865 0.4182 MMTEEVKKSLLTAFTPNGNYLAIMSSNGTAKIWNTKSGDLLAEWKPSDGDSDIYYSCMACSFVRKKRRKEQDTCILALGDVDGNILAVDVSASEKKWTASYSSGVAGLSFANKGRVLRIVGLNGIASEFDAKTGELLKEFKTSKKPVSYLAFSDDEKYVAIVGPKLRVISWENGKEVLKSPEHSGDVQFVSISNDAKALATSEFGGKHIQVWSCDVNSGTINSGPTLPIRHPPIILECHHGFNEDNLTVLAVLGSGAAYVWNLKTSSEEVAKRTKITVTTKKVATDQQNSKVSKKNGTSIIASRLQPSAEKQTAALVTYGSINHPQFSILDISNSGEDIILNAADGTTTAQGHESVEGLPDLELEAAVPTESKKARKRQASSEPDLPTTADKMDFGHGEVADAVLLDNEPTMGEKLASLTLLDEHKAKSDKEQESSILAKPPSADSVHVLLRQALHADDRTLLLDCLYTQDEKVITKSISQLNPSNVLKLLNCLISVIESRGAILACALPWLKCLLLQHASGIMSQESSLRALNSLYQLIESRVSTFKSAIQLSSCLDILYAGVIDEEADEGQTVPVIYEDKDDSEEESEDAMETDQEEQQSDQEFDGDSDIEGSDDEMSE 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02476 621 Pfam Dip2/Utp12 Family 459 560 IPR007148 -
Bva02g02476 621 ProSitePatterns Trp-Asp (WD) repeats signature. 21 35 IPR019775 -
Bva02g02476 621 Gene3D - 95 356 IPR015943 GO:0005515
Bva02g02476 621 MobiDBLite consensus disorder prediction 369 394 - -
Bva02g02476 621 PANTHER WD REPEAT-CONTAINING 65 620 - -
Bva02g02476 621 SMART WD40_4 173 213 IPR001680 GO:0005515
Bva02g02476 621 SMART WD40_4 3 34 IPR001680 GO:0005515
Bva02g02476 621 SMART WD40_4 133 172 IPR001680 GO:0005515
Bva02g02476 621 PANTHER OS01G0649000 PROTEIN 65 620 - -
Bva02g02476 621 MobiDBLite consensus disorder prediction 581 621 - -
Bva02g02476 621 Gene3D - 11 85 IPR015943 GO:0005515
Bva02g02476 621 ProSiteProfiles Trp-Asp (WD) repeats profile. 13 43 IPR001680 GO:0005515
Bva02g02476 621 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 13 268 IPR011047 -
Bva02g02476 621 MobiDBLite consensus disorder prediction 572 621 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02476 Bva-Chr2 23683620 23688606 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02476 K14546 - gmx:100796828 770
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02476 02 23683620 23688606 Bva02g02476 02 23683620 23688606 ECH