Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02472 ATGGCGTCCGGTTCGGCTTCTCTGATGTGGTTCCGAAAGGGTCTTAGGATTCATGACAACCCGGCTCTTGAACACGCTTGCAAAGGCGCGAAGCATGTTTATCCTGTCTTCGTAATCGATCCGCATTACATGGAACCCGACCCAAATGCATTTTCGCCCGGTTCTACGCGTGCGGGTCTGAATCGTATCCAGTTCTTGTTGGAGAGCCTCGTAGACCTTGATCTGAGTCTTAAGAAACTTGGGTCCCGATTATTGGTGCTTAAGGGTGAACCGGGCGAGCTTCTGATTCGTTGCCTGAAAGAGTGGGACATCAAAAAGCTATGTTTTGAGTATGACACTGATCCATATTATCAGGCTTTAGATGTTAAAGTTAAGAACTATGCTCTTTTAGCTGGAATTGAGATTTTTTCTCCTGTGAGTCACACACTGTTCAATCCTTCGGATATTATAAAGAAGAATGGAGGGAGACCACCCCTTAGCTATCAATCATTTGTGAAGCTTGCTGGGCAACCACCATCTCTGCTCTTAACTACCGTTCATTCAGTTCCTCCAGTTGGCGTTCTTGGCAGCTGTAAGGTTTCTGAAGTTCCTACAATCAAAGAACTTGGATATGTGGACATTAAGCAGGATGATTTCTCTCCTTTTAAAGGTGGTGAATCGGAAGCCTTGAAGAGGTTGAAAGAATGCATGAAAAACAAGGAGTGGGTGGCAAACTTTGAGAAACCGAAGGGTAATCCATCAGCATTTCTAAGACCAGCAACTACTGTTCTATCACCTTACTTGAAATTTGGTTGTCTCTCTTCCAGATATTTCTACCATCACatacaagaaatatataaaactgtGCCGAAGCATACATCCCCACCTGTTTCTCTACTGGGACAGTTGTTGTGGCGAGACTTTTTCTACACGGCAGCTTTTGGTACCCCAAATTTTGATAGGATGAGAGGCAACAGTATATGCAAGCAGATACCTTGGAAGGACGATGACAAACTGCTAGAGGCATGGAGGGAGGCTAGGACAGGATTTCCTTGGATTGATGCCATCATGGTCCAGCTACGCAAATGGGGTTGGATGCATCATCTGGCACGGCATTCTGTTGCATGTTTTCTAACTCGCGGTGATCTGTTCGTTCACTGGGAAAAAGGGCGCGATGTCTTTGAGAGGCTTCTAATTGATTCAGATTGGGCAATTAATAATGGAAACTGGCTCTGGCTCTCATGTTCATCATTCTTTTATCAGTATAATCGTATTTATTCCCCGGTCTCATTTGGAAAGAAGTATGATCCTAATGGCGACTTTATCAGGCATTTTCTCCCTGTCTTAAAAGATATGCCCAAGGAGTACATATACGAACCATGGACTGCTCCTTTAAGCGTCCAGACCAAAGCAAAGTGCATAATTGGCAAGGAGTATCCATTGCCAGTTGTTTGTCATGATTCTGCAAGCAAGGAGTGTCGAGCAAGGATGGGCGAGGCATACGCAATGAACCAGAAATTGAATGGTAAGGTAAGCGAACAAGACTCGAGGAGAAAATTAGACCAAGCTCAACAGCAAGAGCGTAAAGCTAAAAGAGTTAGGAAATA 1586 0.4395 MASGSASLMWFRKGLRIHDNPALEHACKGAKHVYPVFVIDPHYMEPDPNAFSPGSTRAGLNRIQFLLESLVDLDLSLKKLGSRLLVLKGEPGELLIRCLKEWDIKKLCFEYDTDPYYQALDVKVKNYALLAGIEIFSPVSHTLFNPSDIIKKNGGRPPLSYQSFVKLAGQPPSLLLTTVHSVPPVGVLGSCKVSEVPTIKELGYVDIKQDDFSPFKGGESEALKRLKECMKNKEWVANFEKPKGNPSAFLRPATTVLSPYLKFGCLSSRYFYHHIQEIYKTVPKHTSPPVSLLGQLLWRDFFYTAAFGTPNFDRMRGNSICKQIPWKDDDKLLEAWREARTGFPWIDAIMVQLRKWGWMHHLARHSVACFLTRGDLFVHWEKGRDVFERLLIDSDWAINNGNWLWLSCSSFFYQYNRIYSPVSFGKKYDPNGDFIRHFLPVLKDMPKEYIYEPWTAPLSVQTKAKCIIGKEYPLPVVCHDSASKECRARMGEAYAMNQKLNGKVSEQDSRRKLDQAQQQERKAKRVRK 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02472 528 MobiDBLite consensus disorder prediction 504 521 - -
Bva02g02472 528 PANTHER CRYPTOCHROME 6 501 IPR002081 -
Bva02g02472 528 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 4 178 IPR036155 -
Bva02g02472 528 Gene3D DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 310 528 - -
Bva02g02472 528 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 5 143 IPR006050 -
Bva02g02472 528 PANTHER (6-4)-PHOTOLYASE, ISOFORM A 6 501 - -
Bva02g02472 528 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 203 496 IPR036134 -
Bva02g02472 528 Gene3D HUPs 1 140 IPR014729 -
Bva02g02472 528 Coils Coil 506 526 - -
Bva02g02472 528 Pfam DNA photolyase 7 167 IPR006050 -
Bva02g02472 528 MobiDBLite consensus disorder prediction 501 528 - -
Bva02g02472 528 Pfam FAD binding domain of DNA photolyase 294 490 IPR005101 -
Bva02g02472 528 Gene3D - 141 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02472 Bva-Chr2 23663070 23667482 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02472 K02295 - gmx:100780347 919.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02472 02 23663070 23667482 Bva02g02472 02 23663070 23667482 ECH