Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02418 ATGTCCTCCTTTTTCCGCAAGCTTGTTTCTTTCAAATACCCCGAAATCAGAATGTTTGAGGGATTATTCAagccaaaattttattcaaaatgCAAAAAGAACGTGAATTGTATAAAGACTCGGCTAGATATAATACGGAAGAAGAAGAGCTCAGTGCAGAAGTATTTGAAGAATGATATCGCTGAGCTTCTTAGGCTTGGTCTCGACATCAATGCATACGGAAGGGCCGAAGGGCTTCTGGTAGAGCAGAACATGTTATCCTGCTACAACTTCGTTGAAAAGTTTAATGAATGCATATCAAACCATCTTGAAGATCTTTCTAAGCAGAGGGATTGCCCTGATGAATGCAAAGAAGCCGTACAGTCGTTGATATATGCTGCAGCATGGTTTGCTGATCTACCAGAATTGCGTGAACTCAGAACTTTGTTTACAGAGAAATTTGGGAATTCTCTTGAACCTTATATAAGTAAAGAGTTTGTGGAGAAGTTGCGGCGAGTTCGTCCTACCAGAGAAATGAAGATCCAGTTATTGCACGACATAGCGCAAGAATTTTCTATAGAGTGGTATAGCAAAGCTCTGGAGCAGAGACTCAGTAGACCTTCTCCGTCACAAGAAGAGCGGTCCAAGCATGATTCTGATGAAAAAAAGGTGAGCAAGAACCATGATCGAGTCAGCCATAAAAGAGACAATCTAGTTGTGAGTGAAAGCAGCAGTGATGGTGAAACAAGTACAGACGATCCTGGCCGGAAGACTGATTCAAGTTTTGGTGATAGTTTTTCTGAGGATGAAGTAGAAAGCAAGAGGCCATTTTCCAGTGGCCTTGTTCCTCCACCGTACCTTAAGCCAAAAGCTAACAAAGATGAAAACAGTTCAAAGAAGACAACTGAAGATGAAGATTCTGCAACCCTGGCTGAAAAGATTAGTCGTTATCTTCTTCCAGAAAAGCCAACAGCAAAATCAGCTAGGAGACCTCTCAAACCACCTCCAAGTGCTACAGAAGGACGTGTCCATCCTAAGCTACCTGATTACGATGACTTAGCGGCTCACATTTCATCTCTCAAGCTCAGAGggagata 1076 0.4136 MSSFFRKLVSFKYPEIRMFEGLFKPKFYSKCKKNVNCIKTRLDIIRKKKSSVQKYLKNDIAELLRLGLDINAYGRAEGLLVEQNMLSCYNFVEKFNECISNHLEDLSKQRDCPDECKEAVQSLIYAAAWFADLPELRELRTLFTEKFGNSLEPYISKEFVEKLRRVRPTREMKIQLLHDIAQEFSIEWYSKALEQRLSRPSPSQEERSKHDSDEKKVSKNHDRVSHKRDNLVVSESSSDGETSTDDPGRKTDSSFGDSFSEDEVESKRPFSSGLVPPPYLKPKANKDENSSKKTTEDEDSATLAEKISRYLLPEKPTAKSARRPLKPPPSATEGRVHPKLPDYDDLAAHISSLKLRGR 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02418 358 MobiDBLite consensus disorder prediction 200 234 - -
Bva02g02418 358 PANTHER IST1 FAMILY MEMBER 25 354 IPR005061 GO:0015031
Bva02g02418 358 PANTHER REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN 25 354 - -
Bva02g02418 358 MobiDBLite consensus disorder prediction 285 304 - -
Bva02g02418 358 MobiDBLite consensus disorder prediction 242 268 - -
Bva02g02418 358 MobiDBLite consensus disorder prediction 197 344 - -
Bva02g02418 358 Gene3D - 19 198 IPR042277 -
Bva02g02418 358 Pfam Regulator of Vps4 activity in the MVB pathway 32 186 IPR005061 GO:0015031
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02418 Bva-Chr2 23401036 23403571 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02418 - - gmx:100790792 323.553